KEGG   Schizosaccharomyces pombe (fission yeast): SPAC22F3.03c
Entry
SPAC22F3.03c      CDS       T00076                                 
Symbol
rdh54
Name
(RefSeq) ATP-dependent DNA helicase Rdh54
  KO
K10877  DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SPAC22F3.03c (rdh54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spo03400]
    SPAC22F3.03c (rdh54)
Enzymes [BR:spo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.-
     SPAC22F3.03c (rdh54)
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     SPAC22F3.03c (rdh54)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD DUF2439 zf-RING_10
Other DBs
NCBI-GeneID: 2541798
NCBI-ProteinID: NP_593038
PomBase: SPAC22F3.03c
Ensembl: SPAC22F3.03c
UniProt: Q09772
Position
I:703669..707990
AA seq 811 aa
MKRRATFQCPLIESTIKHQSTNYTKTETATTSHEVSENANEHKGKSNIDINKIAYYNVVW
RKITMKKHKTWEGDGFLVREDSNLTLYNSDFTRLGSCHSRVPQIKEGELLRISGKEISIE
KEISAESYEAGTHIDDSLRDVHMPEMKRKFKPPLRPNTMYQTISALPKPRHDPTVLGALV
MSRPKTWDPRTHVDVVIDPFLSKHLYSHQREGVSFLYDCLLGMEGKCGYSAILADEMGLG
KTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLGHERIHVYIARC
AEDFQEFTSNKTYSIIITGYETVCTYLRNYGCGIDIDLLICDEAHRLKSMSSQTWITLNK
LKTRKRLLLTGTPLQNDLSEYFSMVNFIIPGSLGTPNSFKAQYERPILRSRSMNASSRDI
SLGAARLQRLFEFTSNFTLRRKANILAKHLPPRTDIVLFIKPTHQQENVYGHVLDGFKSS
VDQKGYYLKILTRLSKICNSTILLRNEKENFLSTELQDKHVFEQENMLLSSSKLQILAAL
LKSFQRGCQKAVIVSQYKETLELIELFLSILHVRFCKLLGSTPFSERDLIVHNFNTSSFK
EFSVLLLSSKAGGCGLNLTGSTRLIIYEPSWNPAQDLQALSRIYRSGQKRPVCIYTFLSS
GMLDERIFIRQNTKQGLSSSFIDSDASQKKNFFTGEDIKTLFSYSKTETCLTYELAFDSD
EIDSLTKKKDPLTKIDHTIDSPNTKEKDKEISSWKKASEYMDTNLGKKCPENAFQGWTWQ
FPNDLSIMNGVEDYIPLEPLPINCLMHKKFE
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgaaacgaagagctacttttcaatgtccattaattgaatctaccataaaacatcaatct
actaattataccaaaacagaaacagcaactacctcacacgaagtatctgaaaatgcaaat
gaacataaaggaaaatcaaatatcgacataaacaaaattgcttattacaatgttgtatgg
agaaaaattactatgaagaaacataaaacatgggaaggggatggctttctcgttagagaa
gactcaaatttgactctttataattcagattttacaagactcggatcctgtcattcgagg
gtgccacaaatcaaagaaggagaattgcttcgcatttccgggaaagaaatatctattgag
aaggaaatctctgcagaaagttatgaagcaggcacacatatagatgattctctccgagac
gttcatatgcctgaaatgaagcgtaaattcaagccacctttgagacctaacacaatgtac
cagacaatatcagcactacccaaaccgaggcatgatcctactgtgcttggagctttggtg
atgagcaggcccaagacttgggatccaaggacgcatgtagatgttgttattgatcctttc
ctttcaaagcatctttattctcatcagcgggaaggagtttcctttctttacgactgttta
ttaggaatggaaggaaaatgtggatatagtgcaattttggctgatgaaatgggcttagga
aaaacgttgcaaactataacagttgtctggactttattgaagcagtcttattacgccaat
cgttcttcgactataaacaatgcaatggtcgtagcacctgtcactcttttgaagaattgg
gaaaatgagttttataattggctcggtcacgagcgtattcatgtttatatagctagatgc
gctgaagatttccaagaatttacgtcgaacaaaacttattcgattatcattacaggatat
gaaacggtttgtacgtacttgagaaactatggatgcgggattgatattgatcttctaatt
tgcgacgaagctcaccgcttgaagtccatgagtagtcagacttggattacgctgaataag
ctaaaaactagaaagaggcttcttctcactggtacgcctttacaaaacgatttgtcagaa
tatttctctatggttaactttataattcctggatctctggggaccccaaattcttttaaa
gctcagtatgagcggcctatattaaggagtagatcaatgaatgcttcctctagggacata
tcattgggagctgcaagacttcaaaggctttttgaatttacaagcaatttcacgttaagg
aggaaagccaatatactggctaaacatttaccgccaagaaccgacattgttttattcata
aaaccaacacatcaacaagagaatgtttatggacatgttctcgatggtttcaagtcaagc
gttgatcagaagggctattatcttaaaattttgactcgcttgagcaagatatgcaatagc
accattttattgagaaatgaaaaggaaaattttttgtcaacggagttgcaagataagcat
gtattcgagcaagagaatatgttgctctcctctagcaaactgcaaatattggctgcgcta
cttaaaagtttccaaaggggttgccaaaaagctgttattgtgtcccaatataaagaaact
ctcgagttgattgaattgtttttatcaattttgcatgtccgtttctgtaaattgcttgga
agtactcctttctctgagcgtgatttaatagtacacaatttcaatacttccagcttcaaa
gaatttagtgtgcttttactttcaagcaaagctggtggctgcggtttaaatcttaccgga
tccactaggttaataatttacgaaccaagttggaaccctgcccaagatttgcaagcattg
tcaaggatatatagaagcgggcaaaagcggccagtctgtatatacacatttttaagcagt
ggaatgctagatgagcgcatttttattcgccaaaatactaagcaagggctttcaagttcg
ttcatagattccgatgcaagccaaaagaagaatttttttacgggtgaagacatcaagaca
cttttttcatattcaaaaactgaaacttgcttgacatatgaattagcatttgattctgat
gaaattgattcattaacaaagaaaaaagatccgttaactaaaattgaccatacgattgat
tccccaaatacgaaggaaaaagataaagaaatcagttcttggaaaaaggcttctgaatat
atggatactaatttggggaaaaagtgtccagagaacgcatttcaaggatggacttggcaa
tttccgaatgacctaagtattatgaatggcgtagaagattatatccctcttgagccttta
cctatcaactgtctaatgcataaaaagttcgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (38)   

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