KEGG   Schizosaccharomyces pombe (fission yeast): SPAC23A1.12c
Entry
SPAC23A1.12c      CDS       T00076                                 

Gene name
frs1
Definition
(RefSeq) putative phenylalanine--tRNA (Phe) ligase beta subunit Frs1
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SPAC23A1.12c (frs1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:spo01007]
    SPAC23A1.12c (frs1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spo03016]
    SPAC23A1.12c (frs1)
Enzymes [BR:spo01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     SPAC23A1.12c (frs1)
Amino acid related enzymes [BR:spo01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   SPAC23A1.12c (frs1)
Transfer RNA biogenesis [BR:spo03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    SPAC23A1.12c (frs1)
 Prokaryotic type
    SPAC23A1.12c (frs1)
SSDB
Motif
Pfam: tRNA_synthFbeta PhetRS_B1 B3_4 B5
Other DBs
NCBI-GeneID: 2541974
NCBI-ProteinID: NP_594442
PomBase: SPAC23A1.12c
UniProt: O42849
Position
I:complement(join(4098303..4100014,4100066..4100123))
AA seq 589 aa
MPTISCDKEELYKALGREYTTQEFDELCFQFGIELDEDTTNDPERSPSERPSLKIDIPAN
RYDMLCLEGIAQALNVFNRRMATPQYKLLPSTTSLTISPETSEIRPYAAAAILRGVKLDP
IRYQSFIALQDKLHANLCRNRTLVAIGTHDFSVMEGPFTYEALKPEEINFVPLNQTQEIN
GSNLLEFYKDSKHLSRYLHIIANSPRYPVILDAKRRVCSLPPIINSEFSKISVDTRDIFI
DVTATDKTKLEIVVNMMTTMFSCYCEEPFTIEPVNIISEHNGCTRVTPNLNPTCFKADID
YLNEACGLSLPEDEICHLLTRMMLTAKPNPNDSKTLLVYVPPLRADILHQCDIMEDLGIA
YGYDNLKHTYPAHSVTFGKPFEVNRLADIIRNEVAYAGWSEVMPFILCSHDENYAWLRKT
DDSKAVQLANPKTLEFQVVRSSLLPGILKTVRENKNHALPIKIFEVSDVAFCDYSRERMT
RNERHLCAIFAGLNSGFEQIHGLLDRVMLMLNTKRIMNPKDSDAVGYWIEAEDDSTFFPG
RCAAVYYRKDFGTAGIRVGVFGVLHPLVLEKFELTSAASAVEIDLTLWV
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgcctaccatcagctgtgacaaggaagagctgtacaaggccctaggaagagagtacaca
actcaagagtttgatgaactctgcttccaatttggaattgagcttgatgaagacactaca
aatgacccagaaagaagtccttctgagcgtccttctttaaaaattgacattccggcaaat
cgctacgatatgctctgcttagaaggaatcgcccaggctttgaatgtgtttaatcgtcgc
atggctactcctcaatacaaattacttccttccaccacttcactcacaatttcccctgaa
acctcggaaattcgtccttatgccgctgcagctatcttacgaggtgtgaagcttgatccc
attcgttaccagagcttcattgccttacaagacaagttacatgcaaatttgtgtagaaac
cgtacccttgtagccattggtacccatgacttctctgtaatggaaggtccgtttacctac
gaggcattaaaacccgaagagatcaatttcgttcctttgaatcaaacccaggaaatcaat
ggttctaatttattagaattttacaaggatagtaaacatctttcccgttatttacacatc
attgccaactctcccagatatcctgtaattttggatgctaagagaagggtttgctcactt
ccccctatcattaatagtgagttcagtaagatcagtgtggatacccgggacatcttcatc
gatgttaccgcaaccgataaaactaaactcgaaattgttgtcaacatgatgaccacgatg
ttctcttgttactgtgaagagccttttaccattgagcctgttaatatcatatctgagcac
aatgggtgtactcgtgttactcctaatttgaatcctacatgttttaaagctgatatcgac
tatttgaacgaagcctgtggattgtcccttcccgaagatgagatctgtcatttgttgacc
cgaatgatgcttacagcaaagcccaacccaaatgattccaagactcttttggtatacgtt
ccacccttgcgcgctgatattcttcaccagtgtgatattatggaggatcttggcattgct
tatggatatgacaatttgaaacacacttatcctgctcatagtgttacatttggcaagcct
tttgaggttaatcgactagctgacattattcgtaatgaagttgcatatgctgggtggtcc
gaggtcatgcctttcatcctttgctcccatgacgagaattatgcatggcttcgaaagact
gatgattcaaaagctgttcaacttgcaaatcccaagactttagaatttcaagttgttcgt
tcaagcttgcttcctggtattttgaaaacggttcgcgagaacaaaaatcatgctttaccg
attaaaatatttgaagtcagcgacgtagccttttgtgattattccagagagcgcatgact
cgtaatgagcgtcatctttgcgccatttttgcaggtttgaactctggttttgaacaaatt
catggcttgttagatcgtgtgatgcttatgttaaatactaaacgcatcatgaatcccaaa
gattccgatgctgtgggatactggatcgaggctgaggacgacagcacctttttcccaggt
cgatgtgcagcagtgtactatcgtaaagattttggtactgctggaattcgcgttggtgta
tttggtgttctccatccccttgttttagagaagtttgaactcacttctgctgcttccgct
gttgaaattgatttgacactttgggtttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (40)   

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