KEGG   Schizosaccharomyces pombe (fission yeast): SPAC23D3.02
Entry
SPAC23D3.02       CDS       T00076                                 
Symbol
rfc2
Name
(RefSeq) DNA replication factor C complex subunit Rfc2
  KO
K10755  replication factor C subunit 2/4
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03030  DNA replication
spo03420  Nucleotide excision repair
spo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPAC23D3.02 (rfc2)
   03420 Nucleotide excision repair
    SPAC23D3.02 (rfc2)
   03430 Mismatch repair
    SPAC23D3.02 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spo03032]
    SPAC23D3.02 (rfc2)
   03036 Chromosome and associated proteins [BR:spo03036]
    SPAC23D3.02 (rfc2)
   03400 DNA repair and recombination proteins [BR:spo03400]
    SPAC23D3.02 (rfc2)
DNA replication proteins [BR:spo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SPAC23D3.02 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    SPAC23D3.02 (rfc2)
Chromosome and associated proteins [BR:spo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    SPAC23D3.02 (rfc2)
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SPAC23D3.02 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    SPAC23D3.02 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_assoc_2 AAA_22 AAA_16 DUF815 RuvB_N AAA_19 AAA_7 AAA_5 AAA_24 AAA_11 Mg_chelatase DNA_pol3_delta AAA_30 DUF2075 AAA_3 ResIII AAA_28 AAA_18
Other DBs
NCBI-GeneID: 2541908
NCBI-ProteinID: NP_594540
PomBase: SPAC23D3.02
Ensembl: SPAC23D3.02
UniProt: Q09843
Position
I:4338673..4339944
AA seq 340 aa
MSFFAPRNKKTEQEAKKSIPWVELYRPKTLDQVSSQESTVQVLKKTLLSNNLPHMLFYGS
PGTGKTSTILALSRELFGPQLMKSRVLELNASDERGISIIREKVKSFAKTTVTNKVDGYP
CPPFKIIILDEADSMTQDAQAALRRTMESYARITRFCLICNYMTRIIDPLSSRCSKYRFK
PLDNENMVKRLEFIAADQAVSMEPGVVNALVECSGGDMRKAITFLQSAANLHQGTPITIS
SVEELAGAVPYNIIRSLLDTAYTKNVSNIETLSRDVAAEGYSTGIILSQLHDVLLKEETL
SSPVKYKIFMKLSEVDKRLNDGADETLQLLDLLSSISVVC
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgtctttctttgctccaaggaataagaaaacggagcaggaagcaaagaaatcaatacct
tgggttgagctttatcgtcccaagacattggaccaagtttcctctcaagaatctactgta
caagtattaaaaaaaacacttttatctaataacttacctcacatgttgttttatggctct
cctggtactggaaagacgtcaaccattctagctttgtctcgtgagctatttggaccgcaa
ttgatgaaatcaagggttttggaattgaatgcttctgatgaacgcggtatctctattatt
cgggagaaagtcaagtcttttgcaaaaacaaccgtaaccaacaaagtcgacggttatcct
tgtcctccttttaaaattataattttggatgaggcagattctatgactcaggatgctcag
gctgctcttcgacgaactatggagtcgtatgccaggatcactaggttttgcctgatctgt
aactacatgaccaggattattgatcctcttagcagtcgctgtagcaagtatcgatttaaa
ccgttagacaacgaaaacatggttaaaagattagaatttatagctgctgaccaagctgtt
agcatggagcctggagttgtcaatgcattggtagaatgctctggcggtgatatgcgaaag
gccattacttttcttcagagtgctgcaaatcttcatcagggtacgccaatcactatttcc
agtgtagaggaattagcgggagctgtaccatataacattatacgctctttattagacaca
gcatataccaaaaatgtatctaacattgaaactttatctcgtgatgttgctgcggaagga
tattcgacaggaataatattatcccaattacacgatgtgctattaaaagaagagacatta
agcagcccagtaaagtacaaaatattcatgaaactttctgaggttgataagcgtctaaat
gatggagccgatgaaactctacaattactggatttactttcttctatttcagttgtgtgc
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (65)   

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