KEGG   Schizosaccharomyces pombe (fission yeast): SPAC27D7.14c
Entry
SPAC27D7.14c      CDS       T00076                                 
Symbol
tpr1
Name
(RefSeq) RNA polymerase II-associated Paf1 complex subunit Tpr1
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spo03021]
    SPAC27D7.14c (tpr1)
Transcription machinery [BR:spo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     SPAC27D7.14c (tpr1)
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_19 TPR_14 TPR_6 TPR_16 TPR_12 TPR_8 TPR_11 TPR_7 TPR_17 ANAPC3 TPR_10
Other DBs
NCBI-GeneID: 2542077
NCBI-ProteinID: NP_594620
PomBase: SPAC27D7.14c
Ensembl: SPAC27D7.14c
UniProt: O42668
Position
I:complement(4536975..4540298)
AA seq 1039 aa
MEGFTLETHASRIIEVPLLGQEDQSVEIDCSSLPSDATELCEILVNEQAPREFWTKFAHE
YYIRGLREQAILILKSGLETLKDSESLCILNANIAAIYLSMAREAMLKKDTDLRDEQLRN
VRTYLEAANNIDSKSEINVLLHGIYRILLNPTDKESLENAARCFDFVLQKSGGNILGFLG
KARILYAKGNYRSALKLYQRALVSNPQFKPDPRIGIGLCFWNLDMKTDALSAWTRVQQLD
PKNTVVDTYIGLYYYDLAFQNVNNDSFVQNYGKALQHIQRAFKTRNNDPVASSILERYVY
SKKNYEGCIKLAENVIQNSFSSSLIADGYYWMGRAYHQMGNNEKAMASYQKAKAADDRHL
LSSVGIGQIQILQNDLTSAKLTFERIAEQNQSCFEALVVLGCLHASDSKPDLTKARMLLD
RAFNLVGSSKLPRVVDSDLYITQARLWEKEDTKKSLGFLTRALDFLESAHMSVGPELLNN
IAVLQYHLGLIPEAHGNIIKAKSVLPDANPELSLLLDYNLARCEEELGNTSVASEAYVSI
LEKHPSFIDARIRKCLLQLSNPNEETFKEIRHIMNADSQNLEVRAFFGWYLSKQKRRPVE
DPEVRHCSQTLRHWHDDIYSLVQLGNAYMRQAREFRVHNDREKLKRQKLYIKAIQSYDQA
IKFDPKNAHAAQGIAIILAQNRQFSKALLILSKVREAIKDATTLINIGNCLAELKQFSRA
IEVFETVYSSTGESDTYGVLSCLGRVWLQRGRESKNVDYLKESVRYATLALEKNPENPSL
LFNVAFVQFQLCELIRQKPENSRTVEDLNFAMQQLDASIETFTKLVSVEHPPYSPTSIEQ
RAKMAKNTTKRQLERAIQAQIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEKQERE
RQLQEERQKMQEEVLEWRKSQQKASEDDMSLSDDEEKQSGKKKKKDRKKRKSKSKQESSD
SGVSEDDEIPLSDARNKTKKRRVNRRVISEEYTFDQDSDAEGNQEEEVSRTIEEKQDNDI
TDNQDDNKELNLFSEEDEE
NT seq 3120 nt   +upstreamnt  +downstreamnt
atggagggttttaccttggaaacccatgcatcgcgaattatcgaagttcctttacttggt
caggaggaccagtcggtggaaatcgattgttctagcttaccaagcgatgccacggagttg
tgtgaaattttggtgaatgaacaagctcccagagaattttggacgaagtttgctcacgaa
tactacattcgtggtttacgagaacaggccatcctaatccttaagagtgggttggaaacg
ctgaaagattcagaaagtctgtgcatcctaaatgccaatatcgctgccatttatttgtca
atggctcgagaggccatgcttaaaaaggatacagacttgcgggacgagcagttacgaaac
gtacgtacatacctcgaagctgccaacaacatcgactcaaaatcagaaattaatgtcttg
ctgcatggaatttacagaattttattgaaccccacagataaggagtccttggaaaatgca
gctcgctgctttgattttgtgttgcagaaatccggaggaaacatccttggttttcttgga
aaagcgcgaatcttgtatgcaaaaggaaattatcgttccgccttaaagctttatcagcgt
gcccttgtctccaatccacagttcaagcccgatcctcgcattggtataggtctttgcttt
tggaatttggatatgaaaacggatgccttatcggcttggactcgtgtacagcagcttgat
ccaaaaaacacagtggtggatacctatattggactttactattacgatctcgctttccaa
aacgtcaataacgacagtttcgtccaaaattacggaaaagctttacaacatattcaaaga
gcatttaaaaccagaaacaacgatcctgttgcttctagcattttggaaagatatgtttat
tccaaaaaaaattatgaaggctgtatcaagttggctgagaacgttattcaaaattctttt
tcctctagcctgattgccgacggctattactggatgggtcgtgcttaccatcaaatgggt
aataacgaaaaggccatggctagttatcaaaaggccaaagcagcagatgatcgacatctg
ctgtccagcgttggaatcggtcaaattcagattttacaaaatgatttaaccagtgccaaa
ttgacgtttgaacgtattgctgagcagaatcaaagttgttttgaggctctagtcgtcctc
ggttgtcttcatgcctcagattcgaagccagaccttacaaaagctcgtatgttgctcgat
cgggcctttaaccttgtcggaagctcaaagcttccacgggttgttgactccgacctctat
attacccaggctagattgtgggagaaggaggacaccaaaaaaagtctcggatttcttacc
agagctctggattttctagaaagcgctcatatgtctgtaggtcctgaattgttaaacaac
attgcagtcttgcagtaccatttgggcctaattcctgaagcacatggaaatattatcaag
gcgaaaagcgttttaccagatgccaatcctgaattaagcttgctcttggattacaatctt
gcacgttgtgaagaagaattgggtaacacttctgtagctagtgaagcgtatgtttcgatt
ctcgaaaaacatccatcttttattgatgcccgtattcgcaaatgtttacttcagttatcc
aatcctaacgaggaaacgtttaaagaaattcgtcatatcatgaacgcagattctcaaaat
ttagaggttcgagcattttttggttggtatttgagtaaacaaaagcgtcgcccagtagaa
gatcctgaagttagacactgctctcagacccttagacattggcacgatgacatttactcc
ctagttcaactcggtaatgcctatatgagacaggcaagagagtttcgtgtacataatgat
cgtgaaaagttaaaaaggcaaaaactttacatcaaagctattcagtcttatgatcaagct
attaaatttgatccaaaaaacgcacacgctgcccagggtattgccattatattagcacaa
aacaggcaattttctaaagctctacttattttgagtaaggttcgtgaagcaattaaggat
gctacaacactcataaacattggcaattgccttgcagaactcaaacagttcagtcgtgct
attgaggtatttgaaaccgtgtattctagtaccggagaaagtgatacttatggtgtattg
agctgtttaggccgagtttggctacagcgtggtcgcgaaagcaaaaacgtcgactattta
aaagaatccgtgcgatatgctacattagctttagaaaaaaatcccgagaatccaagcctt
ttatttaacgttgcctttgtacaattccagctatgtgagctcatccgtcagaaacccgag
aacagtagaactgttgaggatctgaactttgcaatgcaacagcttgacgcatcgattgaa
acttttaccaaactggtgtctgtcgaacatccaccctattctcctaccagtattgaacaa
cgtgcaaagatggctaaaaatactactaagcgtcaattggagcgcgctattcaagcgcaa
atcgaatatgagaagagtgttgctgccaaacttgaagatgctaggattcaaagggaaaag
gagaaggctcgaagattggcagaggaagaagctttacttaaggaaaagcaagaacgtgag
aggcaacttcaggaagagcgacaaaagatgcaagaagaagttttggagtggagaaagagt
cagcagaaggcttctgaagatgatatgagcttgtctgatgacgaagaaaaacagtcaggc
aagaagaaaaagaaagatcgaaaaaagcgtaaatctaaatcgaaacaggaatcctcggat
agcggagtaagcgaagatgatgaaataccattgagcgatgccagaaataaaactaaaaaa
cgtcgtgttaatagaagagtcatatccgaagagtatacttttgaccaggatagtgacgcg
gagggaaatcaagaagaggaggtttctcgtactatcgaagaaaagcaggataacgatatc
acagacaatcaagatgacaataaagagttaaatctattctctgaagaggatgaagaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (57)   

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