KEGG   Schizosaccharomyces pombe (fission yeast): SPAC29A4.15
Entry
SPAC29A4.15       CDS       T00076                                 

Definition
(RefSeq) putative serine--tRNA (Ser) ligase Srs1
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SPAC29A4.15
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:spo01007]
    SPAC29A4.15
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spo03016]
    SPAC29A4.15
Enzymes [BR:spo01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     SPAC29A4.15
Amino acid related enzymes [BR:spo01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   SPAC29A4.15
Transfer RNA biogenesis [BR:spo03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    SPAC29A4.15
 Prokaryotic type
    SPAC29A4.15
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N GCR1_C GED
Other DBs
NCBI-GeneID: 2542163
NCBI-ProteinID: NP_594867
PomBase: SPAC29A4.15
UniProt: O14018
Position
I:complement(5117526..5118878)
AA seq 450 aa
MLDINLFQVEKGGNPEIIRESQRKRGADVGVVDKVIEMYKEWVSLRFELDNTNKSINRVQ
KEIGLKMKAKEDASELLEEKNSLTERKKNLIEQETAKNKEMLNVVSSIGNIVHDSVPVSM
DEDNNEIIRKWAPEGVTVEKKNCLSHHEVLTRLDGYDPERGVKVSGHRGYFLRQYGVFFN
LALIQYGLDFLEKRGYIALQAPTMLNKDVMAKTAQLEQFDEELYKVIDGDEERYLIATSE
QPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIFRVHAFEKIEQFVLTD
PEKSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKYDLEAWFPFQGEYKELV
SCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALCCILENYQTPDGVNVP
KVLQPYMGGKTFLPFTKELPKNSTSKKGKN
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgttagacataaacttgtttcaggttgaaaagggtggaaaccccgaaattatccgcgaa
tcacagcgcaaacgtggagccgatgtcggcgttgttgataaagttatcgaaatgtacaaa
gaatgggtttctcttcgattcgaactcgacaacactaacaagtcgatcaatcgagttcaa
aaagaaattggcttaaaaatgaaggctaaggaagatgcttctgaattgttggaggaaaaa
aattctctcaccgaacgtaagaagaaccttatcgagcaagaaacagccaagaataaagag
atgctcaacgtagtctcttccatcggcaacattgtacatgattctgtaccagttagcatg
gacgaagacaacaatgagattattcgtaagtgggctcccgaaggtgttactgtggagaag
aagaattgtttgtcccatcatgaagttttaactagattggacgggtatgatcctgaacgt
ggtgttaaggtgtctggtcatagaggatactttttgcgtcagtatggtgtctttttcaat
ctcgccctaattcaatatggtcttgactttttagagaaacgtggatatattgcgttgcaa
gcgcctaccatgttgaacaaagatgtcatggctaagactgctcagttagagcaattcgat
gaagagctttacaaagtaattgatggtgatgaggaacgctatttgatcgctacctccgaa
caacctatttctgcctaccatagcggtgaatggtttgaaaagccttctgaacagctccct
cttaagtacgctggatacagtacttgttatcgtcgtgaagcagggtcccatggacgtgat
gcttggggtattttccgcgttcatgccttcgagaagattgaacaatttgttcttaccgat
cctgaaaagtcatgggaagctttcaccgagatgatcaaccatgctgaggacttttataag
tctttagaattgccttatcgtatcgttgccattgtttctggtgctttgaacaatgctgct
gccaagaagtatgatttggaagcttggttccctttccaaggagaatacaaagagcttgtt
tcttgctcaaactgtaccgattatcaatctcgtaacttggagattcgttgtggtgtaaag
aagatgggcgatcgtgaaaagaagtatgttcactgccttaactctactctctgtgctact
gagcgggcactttgctgtatacttgaaaactaccaaactcctgatggtgtaaatgtacct
aaggtgttgcaaccttatatgggaggtaaaactttccttccattcaccaaggaattaccc
aaaaattctacctccaagaagggaaagaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (87)   

Download RDF
DBGET integrated database retrieval system