KEGG   Schizosaccharomyces pombe (fission yeast): SPAC29E6.06cHelp
Entry
SPAC29E6.06c      CDS       T00076                                 

Definition
(RefSeq) putative cysteine--tRNA(Cys) ligase Crs1
  KO
K01883  cysteinyl-tRNA synthetase [EC:6.1.1.16]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SPAC29E6.06c
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:spo01007]
    SPAC29E6.06c
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spo03016]
    SPAC29E6.06c
Enzymes [BR:spo01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.16  cysteine---tRNA ligase
     SPAC29E6.06c
Amino acid related enzymes [BR:spo01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   SPAC29E6.06c
Transfer RNA biogenesis [BR:spo03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    SPAC29E6.06c
 Prokaryotic type
    SPAC29E6.06c
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: tRNA-synt_1e tRNA-synt_1g tRNA-synt_1 tRNA-synt_1f tRNA-synt_1c DALR_2
Motif
Other DBs
NCBI-GeneID: 2542721
NCBI-ProteinID: NP_594564
PomBase: SPAC29E6.06c
UniProt: Q09860
Position
I:complement(4411655..4413919)
Genome map
AA seq 754 aa AA seqDB search
MSTRNPAQSHWGVPKGQRTELYVYNTLTHSKVPFVSNGSNLTWYCCGPTVYDASHMGHAR
NYVTTDILRRILQSYFGYNITFVQNVTDIDDKIILRARQQYLFEEYKKQQGTNKSHSEAR
EKVTEAWFAYAKKNLPEPPSSMSEWPQWLASHDIPTLAINNPKLPMHVDALKSALDALQV
SEASEIISLDGFWPKVQDVLVPLLDAELGSTVTDPAIFRKLAAYWEDDFNKDMANLNVLP
PTAVTRVSEYVPEIVDFVQRIIDRGYAYPVTDGSVYFDTEAFEKGGHFYAKLEPWNKGNR
ELIAEGEGSLAALTGKKRPGDFALWKASKPGEPSWDSPWSKGRPGWHIECSVMASALLGS
NIDIHSGGIDLAFPHHDNELAQSEAYFDCPQWVNYFFHAGHLHIEGQKMSKSLKNFITIK
EILKKFTPRQLRLAFLLQQWNTQLDFKETLLAYVLNIEQALENFFRTVRALMNETEGVSA
NGGHVPEKFDKLEIELLEKFQQTQQNTHLALCDSFNTPLVMQHIDNLVTQANIYIREVGQ
QPCSRLLGQIASWITSMLQIFGLDENGHPNAVGWSSSKGSSSENTDAMPYIRAVSSFRDR
VRELCIAKASSQEILKACDIFRDYDMAALGVSFNDRPQGSALVKLVDAEELIAAREQKLE
EERAKQAKKAQAKAEQEKKQVERVMKGKTSPSEMFKMFKEYLSFDEAGLPTKMRGEDGSE
IDVPKSRKKKLQKEYAQQEKLHKEYLSYIESNKS
NT seq 2265 nt NT seq  +upstreamnt  +downstreamnt
atgtcgactagaaatcccgctcaatcgcattggggtgttcctaaaggacaaagaacggag
ctctatgtatacaacaccttaactcatagcaaggtgccttttgtttcaaatggttccaac
ttaacatggtactgctgtggacctacggtatatgatgctagtcatatggggcatgctcgt
aattatgtgacaactgatatccttcgaagaatcttacaatcttattttggatataacatt
acatttgtacaaaacgttactgatatagatgacaaaattatccttagagctcgtcaacaa
tatttatttgaagaatataaaaagcagcaaggtactaacaaatcccattcagaagctcgt
gaaaaggttactgaggcttggtttgcatatgccaagaaaaatcttcctgaacctccctcc
tcgatgagtgaatggcctcaatggctcgcatcccatgatattcccactttagctatcaac
aatcccaagttacccatgcatgtggatgctttaaagtctgctttggacgctcttcaggtg
agtgaagcttctgaaatcatttctttggatgggttttggcccaaggtacaagatgttttg
gtcccattgcttgatgcagaattgggtagcaccgtgactgatcctgcaatctttcgtaaa
cttgcagcttattgggaagatgacttcaacaaggacatggctaatctgaatgtcttgcca
cctactgctgttacgcgagtttcggaatatgttcctgaaatcgtagattttgttcagcgc
attatcgatcgcggttatgcttatccagttacagacggtagcgtttacttcgacacagag
gctttcgaaaaaggtggtcatttttatgctaaattggagccctggaataaaggaaatcga
gagttaattgctgagggcgagggttccttggctgctctcaccggtaaaaagcgtccggga
gactttgcgctttggaaggccagtaaacctggtgaaccctcttgggatagtccttggtcc
aaaggacgtcctggttggcatatcgaatgttctgtcatggctagcgctctacttggttcc
aatattgatattcactctggtggaattgatttggcattccctcatcacgataatgagttg
gcacaaagtgaggcctattttgactgtccccaatgggtgaattatttctttcatgcaggt
catttgcatattgaaggccagaaaatgtctaaatctcttaaaaattttatcactattaaa
gaaattttaaagaagtttacacctagacaattacgcttggcattcttacttcaacaatgg
aacactcaactcgattttaaggagacccttttggcatatgtcttaaacattgaacaagcc
ttagagaatttcttccggactgttagagctctcatgaatgaaactgaaggtgtaagcgct
aatgggggtcacgtacctgaaaaatttgataagctagaaattgagttacttgaaaaattc
caacaaactcagcaaaatacccatcttgctctttgtgatagttttaatactcctttggtc
atgcaacacattgataatttggttactcaagccaacatttatattcgtgaagttggtcaa
caaccttgctcacgtttacttggacaaattgcatcatggatcacttcgatgctccaaatt
tttggcctcgatgaaaacggccaccccaacgctgttggatggtcatcatcgaaaggaagt
tcttcggagaacactgatgccatgccatacattagggctgtatcttcattccgcgatcgt
gtaagggagctttgcattgctaaagcttcttctcaggagattctcaaagcttgtgatata
tttagagactatgatatggctgcacttggtgttagttttaatgatcgtccccaaggttct
gcacttgtcaaacttgttgatgctgaagagttaattgctgctagggagcaaaagcttgaa
gaggagagagctaagcaagctaagaaagcacaagcaaaagccgaacaggaaaagaagcaa
gtggaacgtgttatgaagggaaagacatcaccatcagagatgtttaaaatgttcaaagaa
tacctttcattcgatgaagcgggtttacctacaaaaatgcgcggcgaagacggctcggaa
atagacgttcccaaaagccgtaagaaaaaattgcaaaaagaatacgctcaacaagaaaaa
ttacataaggagtatttgtcgtatattgaatctaacaaatcttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (48)   

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