KEGG   Schizosaccharomyces pombe (fission yeast): SPAC6B12.15
Entry
SPAC6B12.15       CDS       T00076                                 
Symbol
cpc2
Name
(RefSeq) 40S ribosomal protein cpc2/RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    SPAC6B12.15 (cpc2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spo04147]
    SPAC6B12.15 (cpc2)
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     SPAC6B12.15 (cpc2)
Exosome [BR:spo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   SPAC6B12.15 (cpc2)
  Exosomal proteins of colorectal cancer cells
   SPAC6B12.15 (cpc2)
  Exosomal proteins of bladder cancer cells
   SPAC6B12.15 (cpc2)
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 Nup160 PROPPIN WD40_2
Other DBs
NCBI-GeneID: 2543298
NCBI-ProteinID: NP_593770
PomBase: SPAC6B12.15
UniProt: Q10281
Position
I:2439437..2441027
AA seq 314 aa
MPEQLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLT
GHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQV
VSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLE
TFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALV
FSPNRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFS
GWTDNLIRVWQVTK
NT seq 945 nt   +upstreamnt  +downstreamnt
atgccagaacaacttgtgctccgtgcaactctcgaaggtcactctggatgggttacatct
ctttctactgcccccgagaaccctgatattcttctttccggttctcgtgacaagtccatc
attttgtggaacttggtccgtgatgacgtgaattatggagtcgcacagagacgtttgacc
ggccacagccacttcgtttctgactgtgccctttccttcgatagtcactatgccttgtct
gcctcttgggataagaccatccgtttgtgggatcttgagaagggtgagtgcactcaccaa
ttcgttggccacaccagcgatgtcttatctgtctccatttctcctgacaaccgccaggtt
gtttctggttcccgtgacaagaccattaagatttggaacattattggtaactgcaagtac
actatcaccgatggtggtcactctgactgggtttcttgtgtgcgcttctctcctaacccc
gataaccttaccttcgtctctgctggttgggacaaggccgttaaggtttgggatttggaa
accttctcccttcgcacttctcactatggccatactggttacgtatctgcagtcaccatc
tcccctgatggatctctttgtgcttccggtggaagagacggtaccttgatgctttgggat
cttaacgagtctacccacctctactctttggaagccaaggctaacattaatgcccttgtt
ttctcccctaaccgttactggctttgtgccgccactggttcttccattcgtatcttcgat
ttggagactcaagagaaggttgatgaacttactgttgactttgttggtgttggcaagaag
agctctgagcctgagtgtatttctcttacctggtctcctgatggccaaactttgttctct
ggctggactgataatctcattcgtgtctggcaagttaccaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (61)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (75)   

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