KEGG   Schizosaccharomyces pombe (fission yeast): SPAPB1E7.06c
Entry
SPAPB1E7.06c      CDS       T00076                                 
Symbol
eme1
Name
(RefSeq) Holliday junction resolvase subunit Eme1
  KO
K10882  crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SPAPB1E7.06c (eme1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spo03400]
    SPAPB1E7.06c (eme1)
Enzymes [BR:spo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.22  Endodeoxyribonucleases producing 3'-phosphomonoesters
    3.1.22.-
     SPAPB1E7.06c (eme1)
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     SPAPB1E7.06c (eme1)
SSDB
Motif
Pfam: ERCC4 HisK_sensor
Other DBs
NCBI-GeneID: 2543670
NCBI-ProteinID: NP_594132
PomBase: SPAPB1E7.06c
Ensembl: SPAPB1E7.06c
UniProt: Q9C103
Position
I:complement(3296334..3300116)
AA seq 735 aa
MTLQSTDSAIVIDSEADVDISSSQASPSKDNIALSEHNVITVLDTPQRSTQCDSLLKSFS
TPLVSGSEDVLPSPRDALNITNKKSVTDNLLLSLTSSNQSTNTNLNPSSRVEIINLNSSP
PNSLSSQPKHQEFHLFHTPTIPRTTQLSSKTSSPIVIPDDNEQVASPLSKKAASLTSSPL
KDFQSSPPLSTVLQKSHSLHDILLDTNDDDHFPFTQSPLTKTKSFNDALTSSSSILKPCM
PSIASPTSNRLSHAPSTPNLFPNQDSSNTIDLINNRSKTSVENQERTFNLTSDVHLDSPT
SPSKHSSIEPNTSQEDSFQELPSLNKLSIQSRAFKKMRLPKISRTTDTPPASTSNSNKKN
LDKLKKMRKLCSRSLEPYELDSNTQRKRKRYEDSLKKSKTLDKVDSLNRKMAKELDRKNS
KELQKINKVKRTKEECLSEIILLSPDDWASSWYSTVRSQLDSYNCQFVVNSNQPKDSIMW
KRKVNNVFNSSTNRFELSIEHEQIEPFALLRLKCRDFIKYIEEDQADTFFHEMSEKFKGC
KLILLLEGIPNYFKSLKAELNRQYAAAVNSGTRPLLFGSLSKYQNFTKEKLESEIVRFSF
EHSILINTSNDEKETAQWIVSFTGDIALSRYKHFSKFSARASTTEIGHVKSADRIENSLN
FMLRQILRVTPNIANAICDQFDSIPSLIHHLKTHGEESLTNVVIQSSISERNLGPVLSRR
IYNTFLCKEASSDAP
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgactctgcagtctacagattccgctattgtgatcgattctgaagctgatgttgacatt
tcaagctcacaagcttctccttccaaggacaatattgctttgtcagaacacaatgttata
actgttcttgatactcctcaaagatctactcaatgcgatagtttgctaaaaagtttcagt
actcctttagtttccggctccgaagatgttctccctagtccccgtgatgcccttaatatc
actaataaaaagtcggttaccgataatcttttgctctctttaacttcttcaaaccagtca
acaaacacgaatttaaatccttcttcacgcgtcgaaatcattaatttaaactcttctccc
cctaattccctttcctcgcaaccaaaacaccaagaatttcatttattccatactcccacc
attcctaggactacacaattgtcatcgaaaacctcctctcccatcgttattcccgacgac
aatgaacaagtggcttcccctttatctaaaaaagctgcttctttgacttcttcaccctta
aaagatttccagtcctccccgccgctctccacagtccttcaaaaatcccactcccttcac
gatatactactggacacgaatgatgacgatcatttcccatttacccagagtccgctaaca
aaaacaaaatctttcaacgatgcactaacatcctcatcctctatactaaagccatgcatg
ccatccatcgctagtcctacttctaatcgattatcacatgccccttctacgcctaattta
tttcctaaccaagacagctccaatacaatcgacctcatcaataaccgttccaaaacctcc
gtagaaaatcaagaaagaactttcaatctcacatctgatgtgcacttagatagcccgacc
tctccatccaagcattcttcaattgaacccaatactagtcaggaagatagttttcaagaa
cttccttctctaaacaaactttccattcaaagtagagcttttaaaaaaatgagactaccc
aaaatttcaaggactaccgatacgcctcctgcctctacttcaaattcaaataaaaaaaat
ttggataaattaaaaaaaatgagaaaattatgctctaggagcttggaaccgtacgagcta
gactctaatacacaacgtaagaggaaacgttacgaagattctttgaaaaaatcaaaaact
ttagataaggttgacagcttgaatagaaagatggcgaaagaattggacagaaagaattca
aaggaacttcaaaaaattaacaaagttaagagaaccaaagaagaatgcctatctgagata
attcttttatcgccggatgattgggcttcatcttggtattcaactgttcgctctcaatta
gattcatacaactgccaattcgttgtcaattcaaatcaaccaaaagactcaattatgtgg
aaaaggaaggtaaacaatgtgtttaattcttctaccaaccggtttgaacttagcatagag
catgaacaaatcgaaccttttgccctactacggttgaaatgccgggattttataaaatac
atcgaagaggaccaagctgatactttttttcatgaaatgtctgaaaagtttaaaggctgt
aagctaatactgttgctggaaggcatcccaaactattttaaatctctgaaagcagaatta
aatcgtcaatatgcagcagctgttaatagcggtaccagacctttgttatttggttcttta
tcaaaatatcaaaactttactaaagaaaagttagagagtgaaatcgtccgcttcagtttc
gaacatagtattcttataaacacttcaaatgacgaaaaagaaaccgctcaatggatagtt
tcctttaccggcgacatagctttatctcgttacaagcacttttctaaattttcagctaga
gcctctactaccgaaataggacatgtcaaatccgccgatagaattgaaaactctctaaat
tttatgttgcggcaaatactacgagttacacctaacattgctaacgccatatgcgatcaa
tttgacagtataccatctttaattcatcatctaaaaactcacggcgaggaatcattaacc
aacgttgtcatccaatctagtattagtgaacgaaatttaggtccggttttatcgcgccgt
atatataacactttcttatgtaaagaagcatccagtgatgcaccatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (51)   

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