KEGG   Schizosaccharomyces pombe (fission yeast): SPBC11G11.04
Entry
SPBC11G11.04      CDS       T00076                                 
Symbol
trs20
Name
(RefSeq) putative TRAPP complex subunit Trs20
  KO
K20301  trafficking protein particle complex subunit 2
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spo04131]
    SPBC11G11.04 (trs20)
Membrane trafficking [BR:spo04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    SPBC11G11.04 (trs20)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   TRAPP complex I
    SPBC11G11.04 (trs20)
SSDB
Motif
Pfam: Sedlin_N Sybindin RNA_pol_Rpb5_N VPS11_C
Other DBs
NCBI-GeneID: 2539833
NCBI-ProteinID: NP_595722
PomBase: SPBC11G11.04
Ensembl: SPBC11G11.04
UniProt: Q9USZ5
Position
II:<1762436..1763290
AA seq 136 aa
MTAYAAIIGTKDNPVYELEMGPINEKLDRSLNSHLNQFIVHSSLDIVDQLQWTSNAFYMK
TIDQFHEMYISAYVTPSNMRFMLLHQNQSADNIKLFFQELHELYIKTLMSPFYQPNQPIR
SQAFDLKVRSIARRYL
NT seq 411 nt   +upstreamnt  +downstreamnt
atgacagcatatgcagcaattataggaacgaaagataatcccgtttatgaattagagatg
gggcctataaatgaaaaactagacaggtctttaaattctcatcttaatcaatttatcgtt
cattcgagtttagacattgtggatcagctacaatggactagcaatgccttttatatgaaa
accatcgatcaatttcacgaaatgtatatatctgcttacgttacgccatctaatatgagg
tttatgcttcttcaccaaaaccaaagtgctgacaacattaaactgtttttccaagagctc
cacgaattatacatcaaaactctaatgagtcctttctatcaacctaaccaacctattcgt
tctcaggcttttgatttaaaggtccgttcaattgctagaaggtatctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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