KEGG   Schizosaccharomyces pombe (fission yeast): SPBC16D10.04c
Entry
SPBC16D10.04c     CDS       T00076                                 
Symbol
dna2
Name
(RefSeq) DNA replication endonuclease-helicase Dna2
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03030  DNA replication
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPBC16D10.04c (dna2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spo03032]
    SPBC16D10.04c (dna2)
Enzymes [BR:spo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.-
    3.1.-.-
     SPBC16D10.04c (dna2)
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     SPBC16D10.04c (dna2)
DNA replication proteins [BR:spo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    SPBC16D10.04c (dna2)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     SPBC16D10.04c (dna2)
SSDB
Motif
Pfam: Dna2 AAA_12 AAA_11 AAA_19 AAA_30 Viral_helicase1 Cas_Cas4 Helicase_RecD bpMoxR UvrD-helicase SRP54 DUF87 FtsK_SpoIIIE AAA_7 AAA_16 AAA_14 AAA_18 AAA TrwB_AAD_bind YqeC Mg_chelatase cobW
Other DBs
NCBI-GeneID: 2540148
NCBI-ProteinID: NP_596499
PomBase: SPBC16D10.04c
UniProt: Q9URU2
Position
II:complement(3592291..3597002)
AA seq 1397 aa
MFNDQSKTTSSVKGICATTDNNHGNLKKTNSTPFRKNYLLNGRTKLKLENFAYNASTEIS
SPKISEKKHSSLPIKRKNTFNESSTSFSPFTKAHKEITDDLKPDKSFTRKSDLNSQDMPV
CFQETSKDLCRSSSTQHLLDHQTTDSTIIDMKPVSTNSKSDVFTLYTDETVLLRRCASDN
KPLINNNLSSSNVSENQSRSFGSYDEVKNQGNNLHKVPSLVSIIRNARSSEQSRIAANSS
CLLKGSDTEIDEDDFALEAEDLAALDSLERQYSQLPNSTVTASAKDIEKTAKVNHVGGDL
QSYCSATKASDATINEEPVNLALDKACNSLPDINSDFIDDWDDSCDGCTPGELCEFSSEY
TVLEVHEDFIFHEGNHFRQLKLILEANDILHQLFLRGDWTETSIFVGDSIRVEATFDKDN
TAIVDNDKGLIIIHPKILMSATAVASSFPCLRKAVISDRVGIYGPPTKAMVTGNILHDFF
QHALYRGIDALENVDINLETSIKTYISDIYFADLSLDEIREELDARLPLLKSIVERYLIS
KKNDNNNESIHISRLLDIEESIWSPRFGLKGNIDATVEVVLTEKPESSSTLTLPLELKTG
RYVDNISHFAQSLLYTLLISDRYGINTNQALLCYLENSTIKNLVASNSQLRGLIMTRNSL
AQHNFRRSLPEMISNRKICDHCSLVSECLFFQKMSDKGVANSNGLTESWNEWMREVKDED
LEFYKKWEKLLNQEERLLLLKRGDVLTFDTEELEAYGKTLYPLYITKEDIVCLEIDDRVF
HYKFAFLNDNGYPRNFLHSGFSVGERVFISDEHGHWSLAKGHIVHIQDSCIEVRTRHRLH
IPWLKMPNFDFKKNQVFFGNYEDSKLSFIGSNHTRYRIDKDEFSSGIASIRGTLMSSVLP
DAPLIIRDMIIRLKPPKFCNSALIDPEFLKCLNEDQITALKKCHAAEHYSLILGMPGTGK
TTTISSLIRSLLAKKKKILLTSFTHLAVDNILIKLKGCDSTIVRLGSPHKIHPLVKEFCL
TEGTTFDDLASLKHFYEDPQIVACSSLGVYHSIFNKRKFDYCIIDEASQIPLPICLGPLQ
LAEKFVLVGDHYQLPPLVKNSRTSKDGLSLSLFKLLSEKHPEAVTTLRLQYRMNEDINSL
SSELIYGGNLVCGSKTISQKKLILPKAHLSDGLPDSSSSLHWVNKLINPSHSVIFFNTDD
ILGVESKTNNILENHTEAFLIEQAVSSFLERGVKQSSIGIISIYKSQVELLSKNLKSFTE
IEINTVDRYQGRDKDIILISFVRSNSKNLVGELLRDWHRLNVALSRAKVKCIMFGSLSTL
SSSNIVSHLLKLLEKNKWIFTLNENDIATKFDENSSPIKDCSQVATTNNAKVIIRKNQRF
FNSDNLCEKAILPQLEF
NT seq 4194 nt   +upstreamnt  +downstreamnt
atgttcaacgaccagtcgaaaacaacttcatctgtgaaaggtatatgtgccactactgac
aacaatcatggtaatttaaaaaaaactaattcaactcctttcaggaaaaactatttgcta
aatgggagaactaaattgaagctggaaaattttgcgtacaatgcatctacagaaattagt
tcacctaaaatctctgaaaaaaagcattcttcattaccaattaaacgaaagaatactttt
aatgaatcctcaacatctttttccccatttactaaagctcataaagaaattactgacgat
ttaaagcctgacaaatctttcacgcggaaatctgacttgaatagccaagacatgccagta
tgttttcaagaaacttcgaaggatttgtgtcgtagctcttctactcaacatttgctggat
catcaaacgacggactcaacgattatagatatgaaaccagtgtcaacgaactcaaaatct
gatgtgtttacattatatacggatgaaactgtcctattacgacgatgtgcttcagataat
aagccactgataaacaataatttgtcgagttcaaatgtttcggaaaaccagagtagaagc
ttcggatcgtatgatgaagtaaaaaaccaaggaaataacctgcataaagtccctagcttg
gtgtctataattcgtaatgcaagatcatctgagcaatcaagaattgctgcaaattccagt
tgtcttctcaaaggatcagataccgaaattgacgaggatgattttgccttagaagctgaa
gatctggcagcattagattcccttgaacgccaatactcacaattacctaattctacagta
actgcttctgcaaaggacatagaaaagacagctaaggtcaaccatgtgggaggtgatttg
caatcttattgttcagcaacaaaagcatctgatgctacaataaatgaagaacctgtgaac
cttgctcttgataaagcttgtaattcattgccggatatcaatagcgactttatcgatgat
tgggatgattcgtgtgatggatgcactcctggtgaattgtgcgagttttcctccgaatac
acagtattagaagttcacgaagacttcatttttcatgaagggaatcactttcgacaatta
aagttgattttggaagcaaatgatatactgcatcagttatttttacgcggtgattggact
gagactagtatttttgtaggggattctatccgtgttgaagctacatttgacaaagataat
accgctatcgttgacaacgataaaggacttattatcatacatccgaaaattttaatgtct
gctacggcagtggccagctcttttccttgtttgaggaaagccgtaatatctgacagggtt
ggcatttatggacctcctacaaaagctatggtaactggaaacattttacatgattttttt
caacacgcattatacagaggtattgatgcccttgaaaatgttgatatcaaccttgaaaca
tcaataaaaacatacatctctgatatctattttgctgatttgtcgctcgatgaaattcga
gaggaacttgatgcgaggcttccccttcttaaatctattgttgaaagatatttaataagt
aaaaaaaatgacaacaacaatgaaagtattcacatttcaaggcttctcgatattgaggaa
tccatatggtcacccagatttggattaaaaggtaatatcgatgctacagttgaggtggtt
ttaactgaaaaacctgagtcttcgtcaaccctcacacttccgttagagcttaaaactggc
cgatatgtcgacaatattagccattttgctcaaagtttgctttatacattactcatttca
gatcgttatggtatcaatactaatcaggcattattatgctatttggaaaatagtactatc
aagaatttggttgcaagtaactcccaacttcgagggttgatcatgacaagaaattctctt
gcacagcataactttaggcgcagccttcctgaaatgatttcgaaccgaaaaatttgcgat
cactgcagtttagtttctgaatgtttgttctttcaaaagatgagtgataaaggagtagct
aatagtaacggcttgactgagtcatggaatgaatggatgcgcgaagtaaaagatgaggat
cttgaattttataagaagtgggagaagttattaaatcaagaggaacgactcttactacta
aaaagaggcgatgtgttgacttttgatacagaagagctagaagcttatggaaaaactctg
tatcctttatacattactaaagaggatatcgtttgtttagaaattgatgacagggttttt
cattacaaattcgcttttttaaatgacaatggttatcctcgaaatttcttgcactcaggc
ttcagcgttggtgaacgagtatttatttctgatgaacatggacactggtcactagctaaa
ggacacatagtccatattcaagattcatgtattgaagtacgaactcgtcatcgacttcat
attccatggctaaagatgcctaactttgatttcaaaaaaaaccaggtattttttggtaac
tatgaagattccaaattgtcatttatcggaagtaaccatacgaggtacagaattgataag
gacgaattttcgagcggaattgcatcaataagaggtaccttgatgtcttctgtattacca
gatgctcccttaattataagggacatgattatccgtttgaagcctccaaaattttgtaat
agtgcattaatcgatcctgaatttttgaaatgtttaaacgaagatcaaattacagcttta
aagaaatgccacgctgcagaacattatagtttgatactcggaatgcctggaacggggaaa
accactacaatttctagcttaatcagatcattgcttgccaaaaagaagaaaatacttctt
acttcttttacgcatttagcagttgataacattttaattaaactgaagggttgtgatagc
acaatcgtccgcttaggatctcctcataaaatccatcccctagtaaaagaattttgtttg
actgaaggaacgacgtttgacgacttagcgtcattaaaacatttttacgaagacccccaa
atagttgcatgctcttctctaggggtatatcattccattttcaataaaagaaaattcgat
tattgtataattgatgaggcatcccaaatacctctaccaatttgcttaggccctttgcag
cttgctgaaaaatttgttttagttggtgatcattatcaacttcctcctttagtaaaaaat
tcaagaacatctaaggatggtttgtcgctcagtctatttaaattactatcagaaaagcat
cctgaagccgttaccactttaagactacaatatcgtatgaatgaagacattaattcatta
tctagtgaacttatttatggcggcaatttggtgtgtgggtccaagacgatatcccaaaaa
aaattaattttgccaaaagctcatctaagtgatggtttacccgattcgtcgtctagccta
cattgggtcaacaagttaatcaatcctagtcattcagtcatattttttaataccgatgat
attctgggagttgaatcaaaaactaataatattctagaaaatcatactgaagcttttttg
atagaacaagcagtttcctccttcttggaacgaggcgttaagcaaagttctatcgggata
atttcaatttacaaaagtcaggtggagttgctttctaagaatcttaaatcattcactgaa
atagaaattaacactgtcgatcgttatcaaggaagagacaaggacatcattttaatatct
tttgtgagatccaacagtaaaaacttagttggagaattgctacgcgattggcatcgtttg
aacgttgctttaagcagggcgaaagtgaaatgtattatgtttggctcgttatctactctt
tcgtcttcaaatatagtttctcatttattgaaattattagaaaaaaacaaatggattttc
acgttaaatgagaatgatatagcaacgaaatttgacgagaatagctctccaattaaggat
tgttctcaggttgcaacgacaaataatgctaaagttattattagaaagaaccaaaggttt
tttaatagtgacaatttatgtgaaaaagctattttacctcaactggaattttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (91)   

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