KEGG   Schizosaccharomyces pombe (fission yeast): SPBC16H5.08c
Entry
SPBC16H5.08c      CDS       T00076                                 
Name
(RefSeq) ATP-binding cassette sub-family F protein
  KO
K06185  ATP-binding cassette, subfamily F, member 2
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spo03009]
    SPBC16H5.08c
Ribosome biogenesis [BR:spo03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    SPBC16H5.08c
SSDB
Motif
Pfam: ABC_tran ABC_tran_Xtn AAA_21 AAA_29 SMC_N AAA_15 AAA_23 RsgA_GTPase Dynamin_N AAA_18 AAA_16 AAA_22 AAA_24 MMR_HSR1 AAA_17 FtsK_SpoIIIE FeoB_N DUF2730 DUF87
Other DBs
NCBI-GeneID: 2540078
NCBI-ProteinID: NP_595939
PomBase: SPBC16H5.08c
Ensembl: SPBC16H5.08c
UniProt: O42943
Position
II:2284321..2286432
AA seq 618 aa
MSSKSASKLKREAKKAERLAAKGESVKPSKKNGTKNGKDKEVDGVTKDLSELSTSDPIFE
RSASGVLTSQPMSRDIKIDSYTLSFHGRLLIENATIELNHGQRYGLLGDNGSGKSTFLES
VAARDVEYPEHIDSYLLNAEAEPSDVNAVDYIIQSAKDKVQKLEAEIEELSTADDVDDVL
LESKYEELDDMDPSTFEAKAAMILHGLGFTQEMMAKPTKDMSGGWRMRVALSRALFIKPS
LLLLDEPTNHLDLEAVVWLENYLAKYDKILVVTSHSQDFLNNVCTNIIDLTSKKQLVYYG
GNFDIYMRTKEENETNQMKAYLKQQEEIAHIKKFIASAGTYANLVRQAKSKQKIIDKMEA
AGLVEKPEPPRQFSFEFDEVRKLPPPIIAFNDVAFSYDGNLDHALYRDLSFGIDMDSRVA
IVGKNGTGKSTLLNLITGLLIPIEGNVSRYSGLKMAKYSQHSADQLPYDKSPLEYIMDTY
KPKFPERELQQWRSVLGKFGLSGLHQTSEIRTLSDGLKSRVVFAALALEQPHILLLDEPT
NHLDITSIDALAKAINVWTGGVVLVSHDFRLIGQVSKELWEVKDKKVVKLDCSIEEYKKS
MAKEVQSRDTTAKVKHLI
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgtcgtccaaatcagcgtccaaactgaaaagagaggctaaaaaagctgagcgcttagct
gctaaaggcgagagcgttaagccctctaaaaagaatggaactaaaaatggaaaagataaa
gaagtcgatggagtcacaaaagatttgtcggaactttctactagcgaccctatttttgaa
agaagtgcttctggtgtcttaactagtcaaccaatgagtcgcgatattaaaattgacagt
tacaccctttcttttcacggacgtctgttgatagagaatgccactatcgaactcaaccat
ggtcaacgctatggtcttttgggtgataacggttccggtaaaagtacattcttggaatcc
gtggctgctcgtgatgtggaatatccagaacacattgatagctacttgttgaacgcagag
gctgaaccctctgatgttaatgctgtcgactatattattcagtcagcaaaagacaaggtt
caaaaattggaagccgaaattgaagagttatcaactgccgatgatgttgatgatgttcta
ttagaatccaagtatgaagagttggatgatatggatcctagcacctttgaggcaaaagca
gctatgattttgcatggtttgggatttacccaggaaatgatggccaaacccacaaaggac
atgtctggtggttggcgtatgcgtgttgcactttctcgtgctcttttcatcaaaccctct
ttgcttcttttggacgaacctaccaaccatttggacttagaagccgttgtttggttggag
aattacttagcgaaatacgacaaaattcttgttgtcacttcccactctcaagatttcctc
aacaacgtctgtaccaatattattgatttaacttctaaaaagcagcttgtctactatggt
ggtaatttcgacatttatatgcgtactaaggaagaaaatgaaaccaatcagatgaaggct
tacttaaaacagcaagaggaaattgctcatattaaaaagtttattgctagtgctggtacc
tatgcaaacttggtacgccaagccaagtcgaaacaaaagattatcgataaaatggaggct
gccggtttagttgagaagcccgaacctcctcgtcaattcagctttgaatttgatgaagtt
cgcaaattaccaccacctatcattgcttttaacgacgttgctttctcttatgatggtaat
cttgatcacgctttgtaccgtgacttgtcctttggtatcgatatggactcccgtgtcgcc
attgtgggtaaaaatggtaccggaaagtctacattgttgaacttaatcactgggcttttg
attcccattgaaggcaatgtctctcgttacagtggattgaagatggctaaatactctcag
cacagtgccgatcagcttccctatgacaagtctccacttgaatacatcatggatacttac
aagcctaaatttcccgagagagaacttcagcaatggcgcagcgttttgggcaaattcggt
ttgtctggtcttcaccaaaccagtgaaatccgtactttatctgatggcttgaaaagccgt
gttgtgtttgcagcactcgctttggaacaaccccacattcttttacttgatgaacctacg
aatcacttggatattacctctattgatgccctagccaaagccattaacgtatggactggt
ggtgttgttttggtttctcacgatttccgtctaattggtcaagtttctaaagagttgtgg
gaagttaaagacaagaaggttgtgaaattggactgctccattgaggaatataagaagtcg
atggccaaagaagttcaatctcgtgatactactgccaaagttaagcatttgatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (52)   

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