KEGG   Schizosaccharomyces pombe (fission yeast): SPBC1709.02c
Entry
SPBC1709.02c      CDS       T00076                                 
Symbol
vrs1
Name
(RefSeq) valine--tRNA (Val) ligase Vrs1/Vas1
  KO
K01873  valyl-tRNA synthetase [EC:6.1.1.9]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SPBC1709.02c (vrs1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:spo01007]
    SPBC1709.02c (vrs1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spo03016]
    SPBC1709.02c (vrs1)
Enzymes [BR:spo01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     SPBC1709.02c (vrs1)
Amino acid related enzymes [BR:spo01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   SPBC1709.02c (vrs1)
Transfer RNA biogenesis [BR:spo03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    SPBC1709.02c (vrs1)
 Prokaryotic type
    SPBC1709.02c (vrs1)
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 tRNA-synt_1g tRNA-synt_1_2 tRNA-synt_1e tRNA-synt_1c PepSY
Other DBs
NCBI-GeneID: 2540197
NCBI-ProteinID: NP_595435
PomBase: SPBC1709.02c
Ensembl: SPBC1709.02c
UniProt: O75005
Position
II:complement(1098188..1101503)
AA seq 980 aa
MADKGCEAAQSKDSSAPGSGEPRPKTEKELERERQKAAKLEKYHAKLAAKKAKEEARKPK
LDKKAKIASPVAEYVEKTTPGEKKVLQDLDSPALKSYNPKAVESAWYDWWVKSGFFEPEF
GPDGKPKKEGVFVITSPPPNVTGALHIGHALTIAIQDSLARWNRMLGKTVLFLGGFDHAG
LSTQSVVEKKLWYTQKKTRHDYPRDKFVDIVWEWKEEYHNRIKNQMSRLGGSFDWTREAF
TMDENLSRAVVETFVRLHEENIIYRANRLVNWCTALQTTLSNLEVENVDVPGRTLLKVPG
YDEPVEVGVLTSIAYAVEGSDERIVIATTRPETLLGDTAVAVHPQDPRYKHLHGKFVKHP
FCNRSIPIICDDIIVDMEFGTGAVKITPAHDPNDYEVGKRHNLEFINIFTDDGLLNENCG
EFAGMKRFTARVKVVERLKELGLFVGTKENPMVIPLCGKTSDIIEPVMKPQWWVNQKEMA
AAAAEVVKSGEIEIAPDMSRREFIRWMENIQDWCISRQLWWGHRIPAYFVNLADEPSQDR
SEGRYWVTGRTLEQAEEKAKAAFPGKSFTLEQDEDVLDTWFSSGLWPFSTLGWPKDTSDY
ENFYPTTLMETGWDILFFWIARMVMLGLKLTGKIPFKRVFCHALVRDAQGRKMSKSLGNV
VDPIDVIEGISLQALHDKLLVGNLDSREVEKAKKGQRLSYPKGIPQCGTDALRFTLCSLT
TGGRDLNLDILRVEGYRKFCNKLYNATKFALGRLGSNFVPNKTADLTGNESLVEKWIFHR
LNIAAAAMNKNMEEMNFLQATSAVHQFWLYELCDVYIENSKYLLSDGTEVQQESAKQTLY
TVLDNALRLMHPFMPYVTEEMWQRLPRRPGDKTQTIVKAAFPVERVDYSNEIAAKYYESI
ITVVHSTRSMMAENGIKSDAVVYIHPDEEHSKLITSESASIQSLIKKCKTLSIVDNTFDS
DKCVKNEVLEGSTIFLERNN
NT seq 2943 nt   +upstreamnt  +downstreamnt
atggcagacaaaggctgtgaagctgctcagtctaaggattcttccgcacctggttctggt
gagcctaggcctaaaaccgagaaagaattagagcgtgaacgccaaaaggcggctaagctt
gaaaagtatcatgcaaagctggcggccaagaaggcgaaggaggaggcaagaaagcctaaa
cttgataagaaggctaagattgcttcaccagttgccgagtatgtcgaaaagaccactcct
ggtgagaaaaaagtccttcaagacttggactctcctgctttgaagtcctataatcccaaa
gctgttgagtctgcttggtatgactggtgggtcaagtctggtttctttgaacccgagttt
ggtcctgatggtaaacctaagaaagagggcgtatttgttattacatctcctcctcccaat
gtcactggtgctttgcatattggccatgctcttacgattgctattcaagattcgttagct
cggtggaacagaatgcttggtaaaacagttttgtttctgggtggtttcgatcatgctggt
ttaagtacccaatctgttgttgaaaagaagctttggtacacgcagaagaagactcgccat
gattatcctcgtgataaatttgttgacattgtttgggaatggaaagaagaataccataac
cgtataaaaaaccaaatgtctcgacttggtggttcttttgattggactcgtgaagccttt
actatggatgaaaatcttagtcgtgccgttgttgaaacctttgttcgtttgcatgaggaa
aatattatctaccgtgctaatcgtctcgtgaattggtgtactgctttacaaacaacttta
tcaaaccttgaggtagaaaacgttgacgttcctggccgtactttgctcaaggtccctgga
tatgatgaacccgtcgaagtgggtgtattgacttccatcgcttatgccgttgaaggttct
gacgaacgaattgttattgctactacacgtccagaaacacttctcggagatactgctgtt
gctgttcatccccaggatcctcgttataagcacctacacggtaaatttgtaaaacatccc
ttctgtaaccgttcaattcctatcatctgtgacgacataatcgttgatatggaatttggt
accggtgctgttaaaatcactccagctcatgatcctaacgattatgaagttggaaagcgt
cataatttggagttcattaatattttcactgacgatggtcttctcaatgaaaattgtgga
gaatttgctggcatgaagcgttttactgctcgtgttaaggttgttgaacgactcaaggag
ctcggcttatttgttggtaccaaggaaaatccaatggtaattccactttgtgggaagact
tcggatattattgagccagtcatgaagcctcaatggtgggtgaatcaaaaagagatggct
gcagccgcagctgaagttgtaaagtctggtgaaatcgaaattgctcctgatatgtctcgc
cgagaattcattcgctggatggaaaatatccaagactggtgcatttctcgtcaattatgg
tggggtcatcgtatcccagcctattttgtaaatttagctgacgaaccttctcaagatcga
agtgaaggccgttattgggttactggtcgtactttggaacaagcagaagagaaagctaaa
gctgcttttcctggaaagtctttcacactagaacaggatgaagacgttcttgatacttgg
ttctcctccggattgtggcctttttctacccttggctggccaaaggatactagcgattat
gaaaatttctatcctactactctgatggaaacaggttgggatattcttttcttctggatt
gctcgtatggtaatgttgggtctcaaattaaccggaaagattccctttaaacgtgtattt
tgtcatgcactcgttcgtgatgctcaaggccgcaaaatgtctaaatcattgggaaatgtt
gtggatcctatagatgtcattgagggtatttctctacaagcattacatgataagcttttg
gttggcaatctcgacagcagagaggtcgaaaaagctaaaaagggtcaacggttgagctat
cccaagggtatacctcaatgtggaactgacgctttgcgttttaccctctgttccttgact
actggtggtcgtgatctcaaccttgatatccttcgtgttgaaggatatcgtaaattctgt
aacaagttgtacaatgctacaaaatttgctttgggtcgtctaggttctaatttcgttcct
aacaagactgccgatcttactggtaatgaatcacttgtagaaaagtggattttccaccgc
ttgaacatcgcagcagccgctatgaacaaaaacatggaagaaatgaacttccttcaagct
acttcagctgttcaccaattttggttgtatgaactttgtgatgtttacattgagaactca
aaataccttctaagtgatggtacagaggtacaacaagaatctgctaagcaaaccctctat
actgtccttgacaacgctcttcgtttaatgcatccttttatgccatacgttactgaagag
atgtggcagagacttcctcgtcgtcctggagacaaaactcagactatcgttaaagctgct
ttcccagttgaaagggtagactattctaacgagatagctgctaaatattacgagtctatc
attactgtcgttcactctactcgttcaatgatggctgaaaatggaatcaaatcagatgct
gtggtatacattcatcctgatgaagaacattccaaactcattacttcggaatctgccagt
attcaaagtcttatcaagaaatgcaaaactttaagcatcgttgataatacttttgattcg
gacaaatgcgttaaaaacgaggttttagaaggaagcactatctttttggaacgaaacaac
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (55)   

Download RDF
DBGET integrated database retrieval system