KEGG   Schizosaccharomyces pombe (fission yeast): SPBC215.15
Entry
SPBC215.15        CDS       T00076                                 
Symbol
sec13
Name
(RefSeq) COPII-coated vesicle component Sec13
  KO
K14004  protein transport protein SEC13
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03013  Nucleocytoplasmic transport
spo04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPBC215.15 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    SPBC215.15 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    SPBC215.15 (sec13)
   04131 Membrane trafficking [BR:spo04131]
    SPBC215.15 (sec13)
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SPBC215.15 (sec13)
Membrane trafficking [BR:spo04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    SPBC215.15 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    SPBC215.15 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    SPBC215.15 (sec13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 2540716
NCBI-ProteinID: NP_596692
PomBase: SPBC215.15
Ensembl: SPBC215.15
UniProt: O94319
Position
II:4059950..4061230
AA seq 297 aa
MTTVDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLG
WAHPKFGTILASASYDGHVIVWRETGGVWSELMDHTAHQASVNAVSWAPHEYGALLACAS
SDGKVSVLEFKDDGSCDTRIFTAHEPGCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGCD
NLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEG
DGPWQKTPLTEEKFPDIAWRVSWSLSGNILAVSCGDNKVYLFKESQNKWQLLNELSN
NT seq 894 nt   +upstreamnt  +downstreamnt
atgacgaccgtagatacacagcacgatgatatgattcatgatgcgattttagattattat
ggaaaacgtttagctacgtgctcttctgatcaaaccattaaagttttttcaattgagaac
aatcaacaaacactgttagaaaccttaagaggtcattcaggccccgtttggcaacttggc
tgggcccatcccaagtttggtactatcctagcctctgcttcttatgacggacatgttatt
gtttggcgcgaaactggcggtgtttggagtgagttaatggatcatacagctcaccaagca
tctgttaatgctgtctcctgggccccccatgagtatggtgctctattagcttgtgcaagt
tcagacggaaaagtttctgtgttagaattcaaagatgatggctcttgtgatacccgtatc
ttcaccgctcatgagcctggttgtaacgctgtctgttggtcaccccccagcctgtctggc
tctgttgttggtcaatcccccgctgcgggtcccaaaaaactagccactgccggttgtgat
aatctcgtgaaaatttgggcttttgatgcaggtgtcaacaactggatccttgaagacacg
ttagctggacatgtggattggaccagagacgttgcttgggctcccagtgtgggcctcacc
aaaacttatttagcttccgcctctcaagataaaaatgtttttatttggactaaagaagga
gatggtccctggcaaaaaacccctcttaccgaagaaaaattccctgacatcgcatggcgt
gtatcttggtcattatctggcaatatattggctgtttcttgcggcgataacaaggtatat
ctttttaaagaatcacaaaataaatggcagcttctcaatgaactgagcaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (50)   

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