KEGG   Schizosaccharomyces pombe (fission yeast): SPBC23E6.09
Entry
SPBC23E6.09       CDS       T00076                                 
Symbol
ssn6
Name
(RefSeq) transcriptional corepressor Ssn6
  KO
K06665  general transcriptional corepressor CYC8
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo04011  MAPK signaling pathway - yeast
spo04111  Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:spo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04011 MAPK signaling pathway - yeast
    SPBC23E6.09 (ssn6)
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    SPBC23E6.09 (ssn6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spo03021]
    SPBC23E6.09 (ssn6)
Transcription machinery [BR:spo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     SPBC23E6.09 (ssn6)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_8 TPR_17 TPR_14 TPR_16 TPR_12 TPR_19 TPR_11 TPR_7 TPR_6 TPR_9 ANAPC3 TPR_15 ChAPs
Other DBs
NCBI-GeneID: 2540656
NCBI-ProteinID: NP_596609
PomBase: SPBC23E6.09
Ensembl: SPBC23E6.09
UniProt: O60184
Position
II:3862346..3867052
AA seq 1102 aa
MPQSQVATASPSQNAQPNHGMGSKVLSSDPNASLPPQTAYYASPLHANSVSLPPSHLPRS
TLHPLLSQQQQPAQQSPSLGPAQQNIQQPPSVSIASQPHYAEAIVPIQQVLQPQQYRQLP
PNMVAATNAPQQHPQLQRMMPILSSNQPIQQLPLPNQASPYIPVPLQQQQQSQPQQQPQQ
QQHQQPQQPQPPQQPLQQQQQQRQLHSGIQQPVSTIVSQNGTYYSIPAVNHPMAGQPIAI
APVPAPNQAALPPIPPQALPANGTPNTLASPVTLPAANSAVQNAQPVPMTSSPAMAVVPQ
NKTAATSTLAAQQGANVLPPNAPESVRHLISLNEETWIQIGRLAELFDDQDKALSAYESA
LRQNPYSIPAMLQIATILRNREQFPLAIEYYQTILDCDPKQGEIWSALGHCYLMQDDLSR
AYSAYRQALYHLKDPKDPKLWYGIGILYDRYGSHEHAEEAFMQCLRMDPNFEKVNEIYFR
LGIIYKQQHKFAQSLELFRHILDNPPKPLTVLDIYFQIGHVYEQRKEYKLAKEAYERVLA
ETPNHAKVLQQLGWLCHQQSSSFTNQDLAIQYLTKSLEADDTDAQSWYLIGRCYVAQQKY
NKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDAYSRAIRLNPYISEVWYDLGT
LYESCHNQISDALDAYQRAAELDPTNPHIKARLQLLRGPNNEQHKIVNAPPSNVPNVQTA
KYINQPGVPYSNVPVAQLSGNWQPPHLPQAQLPSATGQSGVVQQPYQTQPSVTNNNVATQ
PVIASTVPVQTAAPSSQTAVPQTIHQSNAFTPRGKHASGSRNSISSTKSPQHKLSDQPRS
RNNSISNVSHRERSNSVSSKSRETRTSASNESDPKKSTQRDSSKKLENSTVVSGSPSSSS
KSDAAKSIKPQKPEPALKPVEGTADPKSTKRNHQETEKTADTDVSSTEPVKRQKTADVND
DVGEEEVKQSVSEQVDSAQLTSEPKSESLPKSPEEKSDDTSNDVTTENTNDINGDSNMDN
VATVDKSTDAVDTSTATVAATTTTAEEELPQKESQERSSPSPENQDSTPLAPKSVSPKQA
ARTLDIDENYDDDEGEKETVSV
NT seq 3309 nt   +upstreamnt  +downstreamnt
atgccccaatcacaagtcgctactgcttctccttcccagaatgcacagcccaaccatggc
atgggctcaaaagtcctctcgtccgacccaaatgcttcgctgccccctcagactgcttac
tacgcttcacccctccatgccaattctgtttcccttcccccttctcatcttcctcgttcc
acattgcatcctctactatctcaacagcagcaacctgcccagcagtctccctctttaggc
cctgcccagcaaaacattcaacaaccaccctctgtctctattgcatcccagcctcattat
gctgaagccattgttcccattcagcaggttctacaacctcaacaataccgacaacttcct
ccaaacatggttgctgctacgaatgcacctcagcagcatcctcagttgcaacgaatgatg
cccatactctcttccaaccaacccattcaacagctaccccttcccaaccaggcttctcct
tacattcccgttcccctgcaacagcaacaacaatcgcaaccccaacaacagcctcaacag
caacaacatcaacagcctcaacaaccgcagccgcctcagcagcctttgcagcaacaacaa
cagcagcgtcagttacattctggtattcagcagcccgtctctacaatagtttctcaaaat
ggtacttactattcgattcctgccgtcaatcatccaatggctggccaacctattgctatt
gcccccgttcctgctccaaaccaggctgcattgcctcccattcctccacaggctcttcct
gcaaatggcaccccaaacaccttggccagtccggtgacccttcctgcagcaaattccgct
gttcaaaatgcccagcctgttcccatgacttcttctcctgctatggctgttgtacctcaa
aataaaaccgcagctacttctacgcttgctgctcaacaaggcgccaatgtgctgccgccc
aacgctcctgaatctgttcgtcatttaatttcacttaacgaggaaacttggattcagatt
ggccgtcttgcagagctatttgatgatcaggataaagccctttctgcttatgagtccgct
ttgcgccagaacccatattcgattcccgctatgcttcaaattgctaccatattacgaaac
cgcgagcaatttccgcttgccattgaatattaccaaactattttagactgtgatcctaag
cagggtgaaatttggagtgctttaggtcactgttatttgatgcaggatgatctttctcgc
gcttattccgcctatcgtcaagctttgtaccatttgaaagatcccaaagatccgaaacta
tggtacgggatcggtattttatacgaccgttatggctctcatgagcatgctgaggaggca
tttatgcaatgcttacgcatggatcccaacttcgagaaggttaatgaaatatattttcgt
ttgggaatcatttacaaacagcagcataaatttgcccaatcgttagagctttttcgtcac
atccttgataatccccctaagcctttaaccgtcttggacatatacttccaaattggtcac
gtatacgagcaacgaaaagagtataaattagccaaggaagcgtatgaacgtgtcttagct
gaaactcccaatcatgccaaggttctacagcaactcggatggctgtgccatcaacagtca
tcttcgtttactaaccaggatcttgctatacaatatctgactaaatctttagaagcagat
gacactgatgctcagtcttggtatctgataggtcgttgttatgtggcacaacaaaaatac
aacaaggcatatgaagcgtatcaacaagctgtgtatcgtgatggtagaaatcctaccttt
tggtgctcgattggtgttttgtattatcaaatcaaccaatatcaagacgccttggatgct
tattcccgtgctattcgcttaaatccttacatctcggaagtctggtatgacttgggtact
ttgtacgagagttgtcataatcaaataagtgatgcgcttgatgcttatcagcgtgctgct
gaattggaccccactaatcctcacatcaaggcaaggttacaattgttacgtggacctaat
aatgaacaacataaaattgtcaacgctcctccttccaatgtcccaaacgtacagactgca
aagtatatcaaccagccaggcgtgccttactctaatgttcctgttgctcagttgtcgggt
aattggcaacctccacacttacctcaagctcaacttccttctgctaccggtcaatcaggc
gtcgtgcaacagccttaccaaacacaaccgtcagttactaataacaacgtggctactcag
ccagtaattgcttctactgttcctgtacaaactgctgctccatcgagccagactgctgtg
ccacagactatacaccaatctaatgcttttactcctcgaggcaagcacgcttcaggttct
cgaaattctatttcgtctaccaagtctcctcaacataagttatcagatcagccgcgttca
cgcaataattctatttctaatgttagtcatcgtgaacgtagcaattcagtttctagtaaa
tcaagggaaacgaggacttcagcttcgaatgaaagtgatcctaaaaaatctactcaacgt
gattcctctaaaaagctggagaatagcacagttgttagtggatcacctagttcaagctca
aaatctgatgctgctaagagtattaaaccacaaaaacccgagcctgctttgaaaccggtt
gaaggcacagctgatccaaagagtaccaagcgtaatcaccaggagactgagaaaactgct
gatactgacgtttcttcgacggagccagtaaagcgtcagaaaactgctgatgtaaatgac
gatgttggagaggaagaagttaagcagtcagtttctgaacaggtggattctgcacagttg
acttcggaacctaaaagtgagagtttacccaagagtcccgaagaaaagtcagatgatact
tctaatgatgttactactgaaaacactaacgatattaacggcgacagcaatatggataat
gtagctaccgttgataagtctacggatgctgttgatacatctacagctactgttgccgct
actactactactgcagaagaggaactgccccaaaaagaatcgcaagagcgtagctctcct
agtcccgaaaatcaagattcgacacctcttgccccaaaaagtgtgagtccaaagcaagca
gcaaggactctcgatattgatgaaaattacgatgatgatgagggagaaaaagaaaccgtg
tcagtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (84)   

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