KEGG   Schizosaccharomyces pombe (fission yeast): SPBC31F10.11c
Entry
SPBC31F10.11c     CDS       T00076                                 
Symbol
cwf4
Name
(RefSeq) protein Cwf4
  KO
K12869  crooked neck
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPBC31F10.11c (cwf4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spo03041]
    SPBC31F10.11c (cwf4)
   03036 Chromosome and associated proteins [BR:spo03036]
    SPBC31F10.11c (cwf4)
Spliceosome [BR:spo03041]
 Complex B
  Other components
   Prp19-related factors
    SPBC31F10.11c (cwf4)
 Complex C
    SPBC31F10.11c (cwf4)
Chromosome and associated proteins [BR:spo03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     SPBC31F10.11c (cwf4)
SSDB
Motif
Pfam: TPR_14 HAT TPR_19 TPR_2 Suf TPR_16 TPR_17 TPR_12 NRDE-2 U3_assoc_6
Other DBs
NCBI-GeneID: 2540328
NCBI-ProteinID: NP_596573
PomBase: SPBC31F10.11c
Ensembl: SPBC31F10.11c
UniProt: P87312
Structure
Position
II:complement(3770856..3773191)
AA seq 674 aa
MTSEAPRVKNKNPAPIQISAEQLLREAVERQDVAFVPPKINITDLEELQEFQGRKRKEFE
DAIRRNRLAMGHWMRYGQWELDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNI
NHARNLFDRAVTQLPRVDKLWYKYVYMEEMLGNITGCRQVFERWLKWEPDENCWMSYIRM
ERRYHENERARGIYERFVVVHPEVTNWLRWARFEEECGNAANVRQVYLAAIDALGQEFLN
ERFFIAFAKFEIRQKEYERARTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVESTV
LDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRR
YVYIWLNYCLFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVA
RKTLGRALGMCPKPKLFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETK
LGDSDRARALYNLAVNQPILETPELVWKAYIDFEFEEMEYGKARSIYQQLLRTAPHVKVW
ISFANFEIAHLEDDDEEPPNEEVASPTAVVRARNVFENALAHLRQQGLKEERVVLLEAWK
QFEAMHGTEDTRKHVSSLMPQVVKKRRRLEDGSFEEYLDYLFPDTATDQGDKMRKMLELS
RKWKEEMAKKKLEA
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgacttcggaagcgcccagggtaaaaaataagaacccagcacccatccaaatctcagct
gaacaattgctccgagaagctgtagaacgacaagatgtggcgtttgttcctccaaaaatt
aatatcactgatcttgaggagcttcaagaatttcaaggtcgaaaacgtaaagaatttgaa
gatgccattcgacggaatcgtctcgctatgggccattggatgcgatatggtcagtgggaa
ttagaccaaaaagaatttgcgagagctcgctctgtttttgaaagagctttggatgtagat
tctacttatataccgttatggctgaaatatattgaatgcgaaatgaagaatcgaaatatc
aaccatgccagaaatttatttgatcgtgctgttacacagcttccccgtgttgataaacta
tggtacaaatacgtatatatggaggaaatgttaggaaatatcaccggttgtagacaagta
tttgaaagatggcttaagtgggagcctgatgaaaactgttggatgagttatattcgaatg
gagaggaggtaccatgaaaacgaacgggctcgtggcatatatgaacgatttgtcgttgtg
catcctgaagtaacgaattggcttcgttgggctcgttttgaagaagaatgcggaaatgct
gcaaacgttcgccaagtctatttggctgctatagatgctcttggtcaggagtttctgaat
gaacggttttttattgcttttgcaaaattcgaaattcgtcaaaaggaatatgaacgagct
cgcaccattttcaaatatgcaattgattttatgccccgatcaaaatctatggaactatat
aaggaatacactcattttgaaaaacaatttggagatcatttgggcgttgagtctactgtg
ctcgataagcgtcgattacaatacgaaaagctattgaaggattctccttatgactatgac
acttggcttgatttgctgaagctcgaagaaagtgcaggggatattaatactattcgcgaa
acctacgaaaaagctattgctaaggttcctgaagtagttgaaaagaacgcatggagacgt
tacgtttatatttggttaaactattgcttatttgaagagatagatgtgaaggacgttgac
cgcgcaagaaaggtttaccaagaagctctcaagcttataccccataaaaaatttacattt
gccaaattatggctcatgtatgcaatgtttgagcttaggcaacgtaagattgatgttgct
agaaaaacgttgggtcgtgcgttgggaatgtgtccaaaaccaaaattattccgaggttat
attgaattcgaagacgcaattaagcagtttgacaggtgtcgaattctttatgaaaaatgg
attctttatgatcccgaggcttgtgctccctggcttggttacgctgccttagagactaag
cttggagatagtgatcgtgctcgcgctttatataatttggctgtaaaccagcctattttg
gaaaccccagagcttgtgtggaaggcttatattgattttgaattcgaggaaatggaatac
ggaaaagctagaagtatttaccagcagttactacggactgcacctcatgttaaagtttgg
attagttttgcaaactttgaaattgcccatctggaggacgatgacgaagaaccaccgaat
gaagaagtggcttctccaaccgctgttgtgcgtgcgcgaaatgtttttgaaaatgcattg
gcccatttacgccagcagggtttgaaggaagagcgagttgtattacttgaagcatggaaa
caatttgaggcaatgcatggcacggaagatacacgtaagcatgtctcttcactaatgcca
caggttgttaagaaacgccgtagacttgaagacggttcattcgaagaatatttggactat
ctgtttccggatacggcgactgatcaaggagataagatgcgcaaaatgctcgaactttcg
cgaaaatggaaagaggaaatggctaaaaagaagctggaggcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (10)   
   Pfam (10)   
All databases (44)   

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