KEGG   Schizosaccharomyces pombe (fission yeast): SPBC336.06c
Entry
SPBC336.06c       CDS       T00076                                 
Symbol
rnh1
Name
(RefSeq) putative ribonuclease H Rnh1
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03030  DNA replication
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPBC336.06c (rnh1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spo03032]
    SPBC336.06c (rnh1)
Enzymes [BR:spo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     SPBC336.06c (rnh1)
DNA replication proteins [BR:spo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    SPBC336.06c (rnh1)
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     SPBC336.06c (rnh1)
   Elongation factors (archaeal)
     SPBC336.06c (rnh1)
SSDB
Motif
Pfam: RNase_H Cauli_VI
Other DBs
NCBI-GeneID: 2540252
NCBI-ProteinID: NP_596126
PomBase: SPBC336.06c
UniProt: Q9UST8
Position
II:complement(2748489..2750034)
AA seq 264 aa
MGGNKRAYYAVARGRNTGIYSTWDEASDQVKGYGGNRYKKFDSYEAAQEFCRTEGSRYSS
SSGPYRRSTTSYGYSPYSSSSSNYSARHSDKYRKKISRSYSTEKDIEIFSNDTHEKSIAC
SDRQVVYADGSSLRNGKKGAVAGCGVFFGNDDPRNISVPLAGEEQTNNRAELQAIILALE
NTSGDLTIRSDSNYSIKSLTTWLPKWKKNDFKTSNSQPVKNLDLINRASDLMSDRNVSLE
YVKGHSTDYGNQQADMLARRGASE
NT seq 795 nt   +upstreamnt  +downstreamnt
atgggtggaaataagcgtgcatactatgcagtagcgcgtggtcgaaatactggtatatat
agtacatgggatgaggcgtcggatcaggtgaaaggttatggaggtaatcgctacaagaaa
tttgacagctatgaggctgctcaggaattttgcaggaccgaaggaagtcgctactcctcg
tcttctggcccatatcgccgcagtacaacaagttatgggtactctccatattcttctagt
tcctcaaattactctgctagacactccgataaatatagaaagaaaatttctagaagttat
agtaccgaaaaagatattgaaatattttcgaatgacactcatgaaaaatcaattgcgtgc
tcggatcgacaggtcgtctatgctgacggttctagtttgcgaaatgggaaaaaaggagct
gttgctggctgtggagtttttttcggaaatgatgacccaagaaatatttcagtaccgttg
gctggggaagagcaaaccaacaatcgtgcggaattgcaagccataatcctagcccttgaa
aatacatctggcgatttgaccatccgctctgacagcaattattccattaagtcactaacc
acatggctgcctaaatggaagaaaaatgactttaagactagcaattcacaacctgtaaaa
aatttggatttgatcaaccgcgcttcagatttgatgagtgacagaaatgtttcgctagag
tacgtgaaaggacacagtaccgattacggtaatcaacaagccgatatgcttgctcggcga
ggagcttctgagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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