KEGG   Schizosaccharomyces pombe (fission yeast): SPBC336.11
Entry
SPBC336.11        CDS       T00076                                 
Symbol
vps52
Name
(RefSeq) putative GARP complex subunit Vps52
  KO
K20298  vacuolar protein sorting-associated protein 52
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spo04131]
    SPBC336.11 (vps52)
Membrane trafficking [BR:spo04131]
 Protein recycling
  Others
   EARP complex
    SPBC336.11 (vps52)
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    SPBC336.11 (vps52)
SSDB
Motif
Pfam: Vps52_C Vps52_CC Sec3_CC
Other DBs
NCBI-GeneID: 2540233
NCBI-ProteinID: NP_596131
PomBase: SPBC336.11
Ensembl: SPBC336.11
UniProt: Q9UST3
Position
II:2759472..2761211
AA seq 508 aa
MQRASTQDVYDGSGDDLNKLDSLKSVLNDVLSSLERFQVDLDVATSDIYKVSERSNKIQV
NLNNLKAVESALGAEIDGAILPPDLIKTISTGDMDHPSWNSALEKLTSFLEGGEDDSSLG
NMFNSLQINKDQKKLVDKLRDKAIERIRNYIVVTIKMFRQAFVDVFPIRKHRLIANKNYY
LFLFKFNRKLALELQRAYINTMNWFYLYHFEQYSRFLDKVHVLKGETIRVEEDRKGLFNL
SKGAQQSYGNQMLSVNLRPQDFDMNSVLTASTMHHIESSPQYIERVYCSWELVLTEHVSS
EYAFLLEYFNLSKDQQATVFAAIFEKTLHFSRKYITGLISSSIDCIGILKSIRFTQKLAL
QAQTNIVPVIEPHYNSMILFLWPRFQAVMDMHCESLRKTNLSVKPEEITSRPHPLSQRVA
ELLYSLSMLSVNVVEAEPVARSASRLAQDYVSMLQNLCKTVNDKRRQSRFLSNNYTLIST
VLSGVSGNLAIEQKTYFEKLNENLTNFQ
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgcagagagcttctacccaggatgtttatgatggaagtggtgatgatctaaacaaactt
gattctctcaagtcagtgttgaatgatgttctgagctctttggagcgattccaggtggat
ctggatgtcgctactagtgatatctacaaagtcagtgagcgctcaaacaaaattcaagta
aatttaaacaatttgaaggcagtggagtcagcacttggagcagagattgatggtgcgatt
cttccacctgatcttataaaaaccatatctacaggagacatggatcatcccagttggaat
tctgcattagaaaaactaacttcgtttttggaaggcggagaggatgattcatctcttggt
aacatgttcaattctctccaaattaacaaagaccagaaaaaacttgtagataagttgaga
gataaagcaattgaacgtattagaaactatatagtcgttactatcaagatgtttcgtcaa
gcgtttgtcgacgtgtttccaatccgaaagcatcgactcattgcaaataaaaactactac
ctctttctttttaaattcaatcggaaacttgcattggaattgcaacgggcttacataaat
acgatgaattggttttatctataccacttcgaacagtactctaggtttttggacaaagtt
catgtccttaagggagaaactattcgcgttgaagaggatcggaaaggactcttcaacctt
tccaaaggagcacaacaatcttacgggaatcaaatgctctcagtaaacttgcgccctcag
gattttgatatgaactctgtgttgacagcatctacaatgcatcatattgaatcttcccca
caatatattgaacgtgtttattgctcatgggaattagtcttgacggaacacgtctcttct
gaatatgcttttttgctggagtactttaacctctctaaagatcagcaggctaccgttttt
gccgctatctttgaaaaaactttacatttttcacgcaaatacattacaggattgatatca
agcagtatcgattgcataggtattttgaagtccattcgttttactcaaaaattagcttta
caggcgcaaactaatatagtgcctgttattgagccacactataactccatgattcttttt
ctgtggcctcgctttcaagctgtcatggacatgcactgtgagtcactccgtaaaactaac
ttatctgtgaagccagaagaaatcacttcgcgacctcatccactttcgcagcgagtagct
gaactactttatagcctttcgatgctaagtgttaatgtcgtagaagccgagcctgttgca
cgaagtgcttcaagactagctcaggattatgtgagcatgttacaaaacctgtgtaaaaca
gttaatgacaaaaggagacaaagtaggtttttgtccaataattataccctcatttcgact
gttcttagcggcgtatcgggaaatttagctatagagcaaaaaacatatttcgaaaagctt
aatgaaaatttaactaatttccaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system