KEGG   Schizosaccharomyces pombe (fission yeast): SPBC651.08c
Entry
SPBC651.08c       CDS       T00076                                 
Symbol
rpc1
Name
(RefSeq) putative DNA-directed RNA polymerase III complex large subunit Rpc1
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SPBC651.08c (rpc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spo03021]
    SPBC651.08c (rpc1)
Enzymes [BR:spo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SPBC651.08c (rpc1)
Transcription machinery [BR:spo03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     SPBC651.08c (rpc1)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 2541094
NCBI-ProteinID: NP_595506
PomBase: SPBC651.08c
Ensembl: SPBC651.08c
UniProt: O94666
Position
II:complement(1249831..1254496)
AA seq 1405 aa
MKDPIDDQIPKRIKHLQFGINGPEEFVKDGTVEVSRRDLYTMTDRSPAEHGALDLHMGTS
NKQINCATCGESMADCMGHFGYVKLALPVFHIGYFKATLTILQNICKDCSSVLLSDQEKR
QFLKDLRRPGIDNLRRSQICKRINDHCKKMRRCSKCDAMQGVVKKAGPLKIIHERFRYVR
KSQDDEENFRHSFDEALKTIPELKMHLSKAHDDLNPLKVLNLFKQITPVDCELLGMDPEH
GRPENLLWRYVPAPPVCIRPSVAQEGATTEDDLTVKITEIIWTSSLIRAALSKGTPISNL
MEQWEFMQLSIAMYINSEMPGLRPSDMPSKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGR
TVISPDPNLRIDQVAVPYRIAKILTFPERVTTQNKKHLQDCIRNGPDVHPGANYVIDRES
GFKRFLRFGNRNRIADDLKIGDIVERHLHDNDVVLFNRQPSLHKLSIMAHLVKVRPWRTL
RFNECVCGPYNADFDGDEMNLHVPQTEEAKTEALELMGIKNNLVSPRNGEPIIAATQDFI
TAAYLLSLKDTFLDRKSISNICCYMMDASTHIDLPPPAIIKPRCLWTGKQVFTVLMKPNR
FSKVLVNLDAKTRSFSRIKSKTPEMCPKDGYLMIRNSEIIAGVVDKSVVGDGKKDSLFYV
ILRDYGALEAAEAITRLSKMCARFLGNRGFSIGIEDVQPGKSLSSQKEILVNKAYATSDD
FIMQYAKGILECQPGMDQEATLEAKISSTLSKVRDDVGEICMDELGPANSPLIMATCGSK
GSKINVSQMVACVGQQIISGKRVPDGFQDRSLPHFHKNSKHPLAKGFVSNSFYSGLTPTE
FLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSSAYDGTVRSSNSDVVQFVYGDDG
LDPTYMEGDGQAVEFKRTWIHSVNLNYDRHDSAMLPYEIIDYVNRALDDPKFLTNCNRDF
IETIRTFVIENIAKYLASVRERRDLAPMLEEPDMDDLDDMEGDEFAPVAKRKSVENIIRV
TEKQLRSFVDRCWEKYMRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVAAQTTLGV
PRIKEIINAAKTISTPIITGQLINDRDERSARVVKGRIEKTYLKDVTSYIEEVYGPVTTY
LSIQVNFDTISKLQLDITLADIAAAIWNTPKLKIPSQQVTVNNTLQQIHVHTSSDGKSSE
TEVYYRLQTYKRVLPDVVVAGIPTINRSVINQESGKIELFMEGTGLQAVMNTEGIVGTKT
STNHVMEMKDVLGIEAARYSIISEIGYTMAKHGLTVDPRHIMLLGDVMTCKGEVLGITRF
GVAKMKDSVLALASFEKTTDHLFNAAARFAKDSIEGISECIVLGKLAPIGTNVFQLIRRT
EEEEEQKPKELLFDTPSLHQLEITA
NT seq 4218 nt   +upstreamnt  +downstreamnt
atgaaagatcctattgatgatcagattcctaagaggataaagcatcttcagtttggaatt
aatggtccagaagaatttgttaaagatggaaccgtagaagtttctaggagagatctgtat
acgatgacagaccgatcaccagcagaacatggtgctttagatttacatatgggtaccagc
aataagcaaattaattgtgctacttgtggtgaatcaatggctgattgtatgggtcatttt
ggttatgttaagcttgctttacccgtttttcacataggatacttcaaggctacgttgacc
attttacaaaatatatgtaaggattgttcttcagttcttctatcagaccaagaaaaacgc
caatttttgaaggacttgagacgtcctggcattgataatctgcgtcggtcacagatatgt
aagagaattaatgatcattgcaaaaaaatgcgccgctgttctaaatgcgacgcaatgcaa
ggtgtggtaaaaaaggctggtcctttgaaaataattcacgaaagatttcggtatgttcgc
aaatcacaagatgacgaggaaaattttcgacactcgttcgatgaagctttgaaaactata
cccgaactgaaaatgcatctctcaaaagcccatgatgatttaaatcctttaaaggtttta
aatcttttcaaacaaattactccagttgattgtgagctactgggaatggatcctgaacat
ggtcgtccagaaaatttactttggcgttacgttcctgctcctcctgtttgcatccgtcct
tcggtagcccaagagggtgctaccactgaagatgatttaaccgtaaaaatcactgaaatt
atttggactagttcgctaattcgtgccgccttaagtaaaggcactcctattagtaattta
atggaacaatgggaatttatgcaactatccattgcaatgtatattaatagtgagatgcca
ggtctccgtccttctgacatgccctcaaagcccattcgggggttttgtcaacgtcttaag
ggtaaacagggtagatttcgtggtaatttgtcgggaaagcgtgtagacttttccggcaga
acagttattagcccggatcctaatttacgaattgatcaagttgccgttccatatcgcatt
gctaaaattttgacatttcccgaaagagtcacaactcaaaacaagaagcacttacaggat
tgcatcagaaatgggcccgatgtgcatccaggtgcaaactatgttatagatcgagaaagc
gggtttaagcgctttttgaggtttggcaatagaaaccgtattgctgatgatttgaaaatt
ggtgatatcgttgagcgtcatctacatgataacgatgtagttttgttcaatcgtcaacct
tcactccataagttatcaatcatggctcacttggtaaaggtacgaccatggcgtacctta
agatttaatgaatgtgtatgcggtccctacaatgccgattttgatggcgatgaaatgaat
ttacatgttcctcaaactgaggaggcaaagacagaagccttggagttgatgggcattaaa
aacaatcttgtaagtcccagaaacggtgagcccattattgcagcaactcaagatttcatt
acagctgcctatttgctttctttaaaagatacgtttttagatcgtaaaagtatctcgaat
atatgttgttatatgatggatgcttcgactcatattgatttacctccacctgccattatt
aaacctcgctgtttatggactggaaaacaagtgtttacagtattgatgaaacctaataga
tttagcaaagttttggtaaatctggatgctaaaactcgatccttctctcgaattaagtca
aagacccctgagatgtgtcccaaagatggatatttaatgattagaaatagcgaaattata
gctggtgttgttgataaatcagttgttggcgatggcaagaaggattcactattttatgtg
attttgcgggattatggagcactagaggcagccgaggcaatcactaggctttccaaaatg
tgtgctagatttttaggtaatcgaggattttccataggtattgaggatgttcaacctggc
aaaagtctttcttctcaaaaagaaatattggtcaacaaagcctatgctacttctgatgat
ttcattatgcagtatgcaaagggaatccttgaatgccaaccaggaatggatcaggaggcc
acgcttgaagcaaaaatttcctcgacactttccaaagttcgtgacgatgtcggagaaatt
tgtatggatgaattgggtcctgctaattcacctctgattatggctacctgtggttccaag
ggttcaaagattaacgtttctcaaatggttgcttgtgtcggtcaacagattattagtggt
aaacgtgttccagatggtttccaagatagatcacttcctcatttccataagaattcaaag
catccgttagctaaaggatttgtaagtaatagtttttacagtggattgacacctactgag
tttctatttcacgctatctctgggcgagaaggtctcgtagatactgcagtcaaaaccgcc
gaaactggttacatgtcacgtcgattaatgaaatcgttggaggatttatcttctgcgtac
gatggtactgttcgaagctcaaatagtgatgttgtacagtttgtttatggtgatgatggg
ttggatccaacgtatatggagggagatggtcaagctgtcgaatttaaacgtacgtggatc
cactctgtcaatttgaattacgatagacacgactctgcgatgttgccatatgaaattata
gattatgttaatcgggcccttgatgatccaaagtttctgaccaattgcaacagagatttt
attgaaactatacgtacatttgttatagaaaatatcgcaaagtatttggcttctgttcgt
gagcgtcgtgacctcgcccccatgcttgaagaaccagacatggatgacctggatgacatg
gaaggggatgaatttgcacccgttgcgaaaagaaaatctgttgagaacattatcagggtg
actgagaagcagctacgctcatttgtagaccgttgttgggaaaagtatatgcgtgccaag
gtagagcctggtacggctgttggtgccattggtgctcagtccattggtgagcctggtact
cagatgactcttaaaactttccattttgctggtgttgctgcccaaactactctaggtgta
cctcgcatcaaagaaattattaacgctgccaaaacaattagtactcccattatcaccgga
cagcttatcaatgatcgtgacgaaagatctgcacgtgtcgttaaaggtcgtattgagaag
acatacctgaaagacgttactagttatattgaggaagtttatggtccggtcactacttac
ttatctatacaagtaaattttgatactatttcgaagttgcagctagatattacattagct
gatattgccgcagcaatttggaatactccaaaacttaagattccatctcaacaagtcact
gttaacaacacacttcagcagattcacgttcacacctcttccgatgggaagagtagcgaa
acagaagtttattacagattgcaaacgtataagcgcgttttaccagatgttgtagttgct
ggaataccgaccattaatcgttcggttatcaatcaagaatccggtaaaattgagctcttc
atggaaggtaccggtttacaggctgtaatgaatacagaagggattgtgggaacgaaaact
agtactaatcatgtaatggaaatgaaggatgtcctaggtattgaagccgcccgttactcc
attatctctgagattgggtatacgatggccaaacatggtcttacagttgatcctcgacac
attatgcttcttggtgatgtgatgacatgtaaaggtgaggttttgggaattacgaggttt
ggtgtcgcaaagatgaaagatagtgttttagcacttgcatcgtttgaaaagactacggac
catttgtttaatgctgctgcgaggtttgcaaaagattctatcgaaggcataagtgaatgc
attgtcctcggtaaactggctcctattggcacgaatgtctttcagcttattagaagaaca
gaagaagaagaagagcaaaaaccgaaagaactattgtttgatactccatctcttcatcaa
ttggaaattacggcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (53)   

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