KEGG   Schizosaccharomyces pombe (fission yeast): SPBC651.09c
Entry
SPBC651.09c       CDS       T00076                                 
Name
(RefSeq) putative RNA polymerase II-associated Paf1 complex protein
  KO
K15178  RNA polymerase-associated protein RTF1
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spo03021]
    SPBC651.09c
Transcription machinery [BR:spo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     SPBC651.09c
SSDB
Motif
Pfam: Plus-3
Other DBs
NCBI-GeneID: 2541123
NCBI-ProteinID: NP_595507
PomBase: SPBC651.09c
Ensembl: SPBC651.09c
UniProt: O94667
Position
II:complement(1255392..1257425)
AA seq 560 aa
MADFQDELLALAGIDDSDVASNRKRAHDDLDDVLSSSSDEDNNENVGQDYAEESGGEGNE
KSEDEFEEKFKNPYRLEGKFKDEADRAKIMAMTEIERESILFEREEEISKLMERRELAIR
LHQQNAQYMAQSTRRSTRDKPLTSAAAGKRDKLTELKKRRQERSARSVSERTRKRSPVSD
YEEQNESEKSEEEEGYSPSYAEEKVEQVSKDNASANLYDLNAIRLGRKHVAEYMYHPIFE
STVTGCFVRVKIGERDGQGVYRLCQVKGILESRKPYRVDGVLTKVSLECFHGRSKRVFDV
NVLSNEPFSDHDFQRWHHQMMEDKLSMPSKNFVQRKLNDLRDMSKYVLSEKEVSDIINRK
KELSRVPSNIAAEKTRLRQRRQAAYVAGNAELVKEIDDQLNTLEELSMGSNQNSNSAMDQ
LAKVNERNRRRNHTEIRLAEQRMNEERRRLSAAATATPMSAPTSVLTGTSPQPSPSLSTS
IMSTPKLNPSESVVVASEKASSPDLSPKLLPSESQIFDEGIAVTQTPNTLEDKDFKLHEK
AVHGIDDIIATVDFGIDINI
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggccgactttcaggatgaattgttggcattagctggtattgatgactcagatgttgct
tcaaaccgtaaaagggctcatgatgatttagatgatgtgttgagcagcagttcagacgaa
gacaataatgaaaatgttggacaggattatgcggaagagtctggaggagaaggaaatgag
aagtcggaagacgaatttgaagaaaaattcaaaaacccgtatcgtctagagggcaagttt
aaagatgaagcagacagagcaaagataatggcaatgacggaaattgagagagagagtatt
ctcttcgaacgtgaagaagaaatttcaaagttgatggaaaggcgtgaattggcaattcgc
ctccatcagcaaaatgctcagtatatggcgcaatctactagaaggtctactcgtgacaag
cctttaacttcagcagccgctggcaaacgtgataagcttactgagctgaaaaagcgccgc
caggaacgttcagctagaagcgtctctgaaagaactagaaaaaggagccctgtttccgat
tatgaagaacagaatgagtcggagaagagcgaagaagaggaaggttactctcccagctat
gctgaggaaaaagttgaacaagtttcaaaagataatgcatccgccaatttgtacgattta
aatgcaattcgtcttgggcgtaaacatgtcgcggagtacatgtatcatcctatctttgag
tccaccgtcactggatgctttgttcgggttaaaattggtgagcgtgatggacaaggtgta
tatcgcttatgtcaagtcaagggtattttagaaagcagaaagccgtatcgtgttgatggt
gttttaactaaagtttcactggaatgttttcatggtcgctcgaaaagagtgttcgatgtc
aacgtcttatcaaatgagcctttttccgaccatgatttccaacgatggcatcaccaaatg
atggaagataagctttccatgccctctaaaaattttgtacaacgaaagctgaatgacctc
agggatatgagtaaatacgttttaagcgaaaaggaggtttctgatattattaacaggaag
aaagagttatcgcgtgttccttcgaacatcgctgctgaaaagacccgtcttcgtcaaagg
agacaagctgcttatgttgctggtaatgcagaattggtcaaggagattgacgatcaatta
aacactttggaagaactttccatgggatctaaccaaaatagtaattctgccatggatcaa
cttgccaaagtgaatgaacgtaatcgacgccgcaaccataccgaaattcgcctggcagag
cagcgtatgaatgaagaacgaagacgcctctcagcagcggctactgccacaccaatgtct
gcacctacttccgtactgacgggaacaagtcctcaaccttcaccttccctttctacctcc
attatgtctaccccaaagctgaaccccagtgaatcagtcgtcgttgcctctgaaaaggca
tcatctcctgacctgagtcctaagctattaccttctgaatcccaaatttttgacgaaggc
attgcagtgactcaaaccccgaacacgttggaggacaaagatttcaaacttcacgaaaaa
gctgttcacggaattgatgatattattgctactgtggattttggcattgatatcaacatt
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (39)   

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