KEGG   Schizosaccharomyces pombe (fission yeast): SPBC8D2.06
Entry
SPBC8D2.06        CDS       T00076                                 
Symbol
irs1
Name
(RefSeq) putative isoleucine--tRNA(Ile) ligase Irs1
  KO
K01870  isoleucyl-tRNA synthetase [EC:6.1.1.5]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SPBC8D2.06 (irs1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:spo01007]
    SPBC8D2.06 (irs1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spo03016]
    SPBC8D2.06 (irs1)
Enzymes [BR:spo01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.5  isoleucine---tRNA ligase
     SPBC8D2.06 (irs1)
Amino acid related enzymes [BR:spo01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   SPBC8D2.06 (irs1)
Transfer RNA biogenesis [BR:spo03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SPBC8D2.06 (irs1)
 Prokaryotic type
   Other AARSs
    SPBC8D2.06 (irs1)
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 DUF5915 tRNA-synt_1g tRNA-synt_1e
Other DBs
NCBI-GeneID: 2541245
NCBI-ProteinID: NP_595569
PomBase: SPBC8D2.06
Ensembl: SPBC8D2.06
UniProt: O13651
Position
II:1369014..1372569
AA seq 1064 aa
MSFNVPKEEEKIVEFWREIDAFHTQLKLSQGRPTYTFFDGPPFATGRPHHGHLLASTIKD
SVTRYACLKGYHVERRFGWDTHGLPVEHEIDKKLGITGSDDVMAMGIDKYNAECRKIVMT
YASEWRATVERLGRWIDFDNDYKTLYPSFMESVWWVFKELHTKGKVYRGYRVMPYSTACT
TPLSNFEAQQNYKEVPDPAIVVAFQSISDPEVSFLAWTTTPWTLPSNLALAVHPDLQYIK
ILDKDSNKKYILMESCLGILYKNPKKANFEILERFQGKALDGQKYEPLFPYFKSTFGERA
FKLYSADYVEEGSGTGIVHQAPAFGEADYDAAWAAGIIDADHQPPCPVDEQGLLTSEITD
FAGQYVKDADKEIIRSLKASGHLVKHSQIFHSYPFCWRSDTPLIYRAVPSWFVRVKEITN
EMVENVMSTHWVPQNIRDKRFANWLKNARDWNISRNRYWGTPIPLWVSDDYEEVVCIGSI
KELEELSGVSNITDIHRDSIDHITIPSKKGKGTLHRVSEVFDCWFESGSMPYASRHYPFE
RIEEFKHGFPADFISEGVDQTRGWFYTLTVLGTLLFDKAPYKNVIVSGLVMAEDGKKMSK
RLKNYPEPNLIIEKYGSDALRLYLINSPVVRAEILKFKEDGVREVVTRVLIPWWNSYKFF
EAQAALYKKVTGKDFVFDDAATLSSNVMDRWILARCQSLIGFVDEEMKQYRLYTVVPQLL
GLIEEMTNWYIRFNRRRLKGEDGEIETINALNVLFEVLFTLVRIMGPFTPFITENIYQHL
RNYMPIDKNEISLRSVHFLPFPTYKSELDDETVLRRVKRMQTIIELARYVREQNNISLKT
PLKTLIVILTNEEYLEDAKLLERYIAEELNVREVVFTSNEEKYGVVYSVQADWPVLGKKL
RKDMARVKKALPNVTSEEVKEFQKNKKMVLDGIELVEGDLQIIRSVEVKNEFLKSNTDGI
CIVLLDIEIDAQLQAEGLAREVINRVQRLRKKSNLQVTDDVRMTYKIKNDTIGLESAVDS
NEALFSKVLRRPIEKETGADESNIIASEEQDVQGATFLLSLLRL
NT seq 3195 nt   +upstreamnt  +downstreamnt
atgtcgtttaacgttcctaaagaagaggaaaaaatcgttgagttttggcgcgaaatcgat
gcgttccatactcagttaaaactttctcaaggtcgtcctacttatacatttttcgatgga
cctccattcgctaccggtcgtcctcatcatggtcatcttttggcttctaccattaaggat
agtgtcacccgttatgcttgcttgaagggttatcacgtcgagcgtagattcggttgggat
acacatggacttcctgttgagcatgaaatcgacaaaaagttgggtattactggaagtgat
gatgttatggctatgggtattgacaaatacaatgccgaatgtcgtaaaattgtcatgact
tatgcatccgaatggcgtgcaacagttgaaagactgggccgttggattgattttgataac
gattataaaacgttgtatccttctttcatggaaagtgtttggtgggttttcaaagagttg
catacaaaaggaaaagtttaccgcggatatcgtgttatgccttactcgactgcatgtaca
acacctttgagtaactttgaagctcaacaaaactataaggaagtcccagatccggctatt
gttgttgcctttcaatccattagtgatcctgaagtttctttcttagcttggactactact
ccatggaccttgccttctaaccttgctttggctgttcaccctgacttacagtacataaaa
attttggacaaggattctaataagaaatatatccttatggagagctgccttggcatcctt
tacaagaacccaaaaaaggcgaactttgaaattttggaacgtttccaaggaaaggccttg
gatggtcaaaagtatgaacctctcttcccttatttcaagagcacttttggcgaaagagca
tttaaattatattctgctgactacgttgaagaaggcagtggtactggtatcgtccatcaa
gctcctgcttttggtgaagcagattatgacgctgcttgggctgctggcatcatcgatgct
gatcaccaacctccttgccctgttgatgagcaaggtttgcttacttcggaaatcacagac
ttcgctggccaatatgttaaagacgcagataaggaaattatccgctccttgaaagcatct
ggccatttggttaagcatagtcaaattttccatagttatccattttgctggcgttccgat
acacctctaatttatcgtgccgttcccagttggtttgttcgcgtgaaggagatcactaat
gagatggttgaaaatgtcatgagcactcactgggtccctcaaaacattcgtgataaacgt
tttgcgaattggttgaagaatgctcgtgactggaacatttcccgtaacagatactggggt
acccctatcccactttgggttagtgatgactacgaagaagtcgtttgcattggttccatt
aaggagcttgaagaactttccggcgtttctaatattacagacattcatcgtgacagtatt
gatcatatcactattccttctaaaaaaggtaaaggaacattgcatcgtgtcagtgaagta
tttgactgttggtttgaatctggcagcatgccttatgcttctcgtcattaccctttcgaa
agaattgaggaattcaagcatggcttccctgctgactttatttccgagggtgttgatcaa
acccgtggatggttttatactttaactgttttgggaactttgttattcgacaaagcacct
tataaaaatgtaattgttagtggtctggtaatggctgaggatggtaaaaaaatgtccaaa
cgtcttaaaaattaccctgaaccaaatctcatcattgaaaaatatggttctgatgccctt
cgtttgtatctcatcaactctccagttgttcgtgctgagattcttaaatttaaggaagat
ggtgtaagagaagttgttactagagttttgattccttggtggaacagttataagtttttt
gaggcgcaagctgctctttacaagaaggttactggtaaagactttgttttcgatgatgct
gccactttgagttccaatgtaatggatcgctggattttagctcgttgccagagcttgatt
ggatttgttgatgaagaaatgaaacaataccgtttgtacaccgtggtccctcaacttctc
ggtttaattgaggagatgactaactggtatatccggtttaacagacgtcgtttgaagggt
gaagatggtgaaattgaaactattaatgctttgaacgttttgtttgaagtcttgttcacg
ttagttcgtattatgggcccattcacccctttcattactgaaaacatttatcaacacctt
agaaactacatgcctattgacaaaaatgaaatttcacttcgttcagttcatttccttcct
ttccctacttacaagtctgagcttgatgatgaaactgttttacgccgtgttaagcgtatg
caaactattatcgaattggcgcgttatgttcgtgagcagaataatatttctttgaagact
cccttaaaaacccttattgttattctcactaacgaagaatacttggaagatgctaagctc
ttagaaagatatattgcagaggagcttaacgtccgtgaagtagttttcacctccaatgaa
gagaagtatggagtcgtatacagcgttcaagcagattggcctgttttgggtaagaagctt
cgcaaagatatggctcgtgttaagaaggctctaccaaatgttacttctgaggaagttaaa
gagtttcagaagaacaagaaaatggttttggatggtatcgaacttgtcgagggagattta
caaattattcgttctgtggaggttaagaacgagtttttgaaatcgaacactgatggcatc
tgtattgttttattagatatagagatcgatgctcagttgcaagctgaaggtttggctcgc
gaagttatcaaccgtgttcaacgtttgcgcaagaagagcaatttacaagttacggacgat
gttcgtatgacttataaaataaaaaacgatactattggtctcgaatctgctgtagattcc
aatgaagccttattttcgaaggtattgagaagacccatcgaaaaggaaactggtgctgac
gagtcaaacataattgcttccgaagaacaagacgtgcaaggagctaccttccttctcagt
cttcttaggctatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (44)   

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