KEGG   Schizosaccharomyces pombe (fission yeast): SPBC947.01
Entry
SPBC947.01        CDS       T00076                                 
Name
(RefSeq) AAA family ATPase
  KO
K22766  fidgetin-like protein 1 [EC:5.6.2.-]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:spo03036]
    SPBC947.01
   03400 DNA repair and recombination proteins [BR:spo03400]
    SPBC947.01
Enzymes [BR:spo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.-
     SPBC947.01
Chromosome and associated proteins [BR:spo03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    SPBC947.01
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     SPBC947.01
SSDB
Motif
Pfam: AAA Vps4_C AAA_lid_3 AAA_22 RuvB_N AAA_2 AAA_16 AAA_24 AAA_5 TIP49 IstB_IS21 Mg_chelatase DUF815 AAA_14 AAA_33 AAA_18 AAA_25 NACHT bpMoxR AAA_7 RNA_helicase AAA_28 PhoH AAA_30
Other DBs
NCBI-GeneID: 2541249
NCBI-ProteinID: NP_595275
PomBase: SPBC947.01
Ensembl: SPBC947.01
UniProt: O43078
Position
II:complement(679903..682675)
AA seq 660 aa
MDSDLDRILPIASRALLCEGNRDWAGAYVSYCKVLEEMKKSSAARDRMGLGPLTGAEACS
WNGLYDNCLSKASKLRKTILESEMERQNYQLAAKLSKKAPVDLHPLRPVRSQTPAYTPMT
TRMMYRQTRGAQSEVNLSTPKQIYSKHSPPSTSTSSIVSSSYGDAPSYLAPSKPNRSPPL
KPEDPFASFNSSASAIAAASKSAAASASALSSDTGRSATMNSTTFPTAMKSQSTTKPTLS
NSVSSPSIQVSNNQNANNSTPLSFHAPIPPLHVPAVPLTSASHSSSDGKSRKHPSPYKPY
LNSSHDTLGSSTRPSSADTAGSPATSPPATADSKTIVSKTISASTTQQTEPLQQTTPSSD
FEYAIMNEIISNHEPVYWSDIAGLDDAKNSLKEAVIYPFLRPELFQGLREPVQGMLLFGP
PGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEI
DSILSARNDSGNEHESSRRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDE
AARRRFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEEDLEELVNLTEGYSGSDITALAK
DAAMGPLRNLGDALLTTSAEMIPPISLNHFKASLRTIRPSVSQEGIHRYEEWNKQFGSQR
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggactcagacttggatagaatactaccgatagcatcaagagcattattgtgtgaagga
aatagggattgggctggtgcgtatgtgagttactgcaaggttttagaggagatgaagaag
tcgtcggcagctcgcgatcgcatgggattgggacctttgacgggcgcagaggcatgttct
tggaacgggctctatgacaactgtttgagcaaggcaagcaagctgcgtaagacgattttg
gaaagtgaaatggaaaggcaaaattatcaacttgcagccaaactttcaaagaaggcgccc
gttgatcttcaccccttacgtccagtaagatctcaaacacctgcgtatacccccatgact
actaggatgatgtacagacagacgagaggtgcgcagtcggaggtaaatttatctacgcct
aagcaaatatattccaagcattcgcctccttctacctccacttcatccattgtttcttct
tcctatggagatgcaccttcttatctggcaccctctaagccaaaccgttctccacccctc
aaacccgaagatccctttgcctctttcaattcttctgcttcggccattgctgctgcttct
aagagtgctgccgcttctgcttctgctctttcttctgatacaggtcgttctgctaccatg
aattccaccacttttcctaccgctatgaaaagtcagtctacgactaaaccgacgctttcc
aattcggtatctagcccttctattcaggtgtcaaacaatcaaaatgctaacaatagcact
cccctctccttccatgcgccaattcctccactccatgttcctgccgtcccccttacgtct
gcatcgcattcatccagcgatggaaaatcgcgcaagcatcctagcccatataaaccatac
ttaaactcttctcatgatacccttggttcttccactcgaccgtcttccgctgacacagcc
ggatcacctgctacatctcctccggcaaccgctgattctaagacaattgtgtcaaaaact
atctcagctagtactactcaacaaactgaacctcttcaacagaccactccttcaagtgat
tttgaatatgctattatgaatgaaattatttctaaccatgaacctgtctactggtcggac
attgccggattagatgacgctaaaaattccttgaaagaggcagtcatttatccgttttta
cgcccggaacttttccaaggattgcgtgaacccgtacaaggcatgcttctttttggcccc
cctggcaccggcaaaaccatgcttgctcgtgctgttgcgaccgaagcgaaagccacattt
ttttcgatttcggcttcatcattaacctcgaaatatcttggtgattctgaaaagttggtt
cgagccctttttgaagttgcgaagcgccagacatgtagcgttatctttgttgatgaaatt
gattccattctttccgctcgtaatgacagcggtaatgagcacgagagctctcgtagatta
aaaacagaatttttaattcaatggtcttcgttaactaatgcggctccggacaagcaaact
ggtcactctccccgtgttttggtgctggcagctacaaatcttccgtggtgtattgatgag
gctgctcgacgccgattcgttaaaagaacctatattccgttacctgaaaaagaaacaaga
tataaacatctttctcatttgcttcataatcaagtacactgtttgacggaggaggatctg
gaagaacttgtcaatcttaccgaaggttattcaggctctgatatcactgctttagccaaa
gacgcagcaatgggtcctttaagaaacttgggtgatgctctacttaccaccagtgcagag
atgatacctccgatcagcttgaatcattttaaagctagccttcgtactattcgtccaagt
gtctcacaagagggtattcatcgttacgaagagtggaataaacaatttggttcgcaacgt
taa

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Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (24)   
   Pfam (24)   
All databases (96)   

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