KEGG   Schizosaccharomyces pombe (fission yeast): SPCC1235.09
Entry
SPCC1235.09       CDS       T00076                                 
Symbol
hif2
Name
(RefSeq) Set3 complex subunit Hif2
  KO
K04508  transducin (beta)-like 1
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:spo03036]
    SPCC1235.09 (hif2)
Chromosome and associated proteins [BR:spo03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    SMART complex
     SPCC1235.09 (hif2)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 LisH eIF2A RMC1_N NBCH_WD40 Nbas_N WDR93
Other DBs
NCBI-GeneID: 2538701
NCBI-ProteinID: NP_587735
PomBase: SPCC1235.09
Ensembl: SPCC1235.09
UniProt: O74845
Position
III:194371..196528
AA seq 564 aa
MDTNQVNYIIWRYLKECGYSHTKFAFERETGIQNLDKQWGSTCQVGALVEILQKGLQYVE
LEKHYVDNHSSNEEASKTSIDGESLVNENPCKLPFYLTVPHICETTLTKADSTNGFCEHN
NSNDHQLKILQDKGSGSPSSPVMPFKDKIEKRDIDITMADESNVEKDPARPIAVYNSSPV
TEITEIKQVTFTGGEDIKSDFFKVIPTKHPVTCADWRPLLQENYHVYEFSIGMTNATLAS
VSICEEQNDFKAKTDYCLQSSFDNQDITGVAWNNSGSFLAYAFFSGVIEIYDSHGSQILS
FHNNKGPVLSLKWSGTDTYLAAGSADGTITLFDQLKQTQYSIDTLASSVLDIEWISFDEF
VTSDVEGSLRVYKVDGKAPVSTVSHAHDNSIVALRYNLRISLLLTASSDTTVKLWSRGDA
GAFECLHVFSFSSPVNCIDWNLREGTPILAVASNSIVSMYNAISLQQLAVFMRHTAPVSA
LSFSHNGRYLATGDTSGGVCIWSCKTAKLFKELGSDNSELIAVTNVLPEEQVNFLRWSFD
DKDLLIGKQKKEIICCCDFLHDSL
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggatacgaatcaagttaattatataatctggagatatttgaaagaatgcggttattcg
catactaaatttgcatttgaaagggaaacaggcatccaaaatttagacaaacaatgggga
agtacttgccaggttggcgctttagtcgaaattctgcagaagggtttacagtacgtggag
ctcgaaaagcactacgttgataatcactcctcaaacgaagaagctagcaaaacatctata
gatggagaaagtcttgtaaatgaaaatccttgtaaactccctttctatctcaccgtacct
catatatgcgaaacgacactgacgaaagctgactctaccaatgggttttgcgaacacaat
aattctaatgatcaccaacttaaaattttacaagataaggggtctgggtcgccttcatct
ccggtcatgccatttaaggataaaattgagaaaagggatattgacattactatggccgat
gaatcaaacgtagagaaggatccggctcgacctatagccgtgtacaacagttcacctgtc
acggaaataacagaaataaaacaggttacttttactggcggcgaagacataaagtcggat
tttttcaaagtaattcctaccaaacaccccgttacctgtgcagattggcgtccactatta
caagaaaattaccatgtttacgaattttctattggtatgacaaacgctactctggcttca
gttagcatttgtgaagagcaaaatgatttcaaggcaaaaacagattattgtctgcaatct
tctttcgataaccaagatatcactggcgttgcttggaataattctggttcttttttagcc
tacgcattcttcagcggtgtgattgaaatttacgatagtcatggttctcaaatccttagc
tttcataacaacaaaggccctgttttatctttgaaatggagcggtactgatacatatcta
gctgctggttcggcggatggaactattacactctttgatcaactgaagcaaacacaatat
tcaattgacacacttgcatcttccgttttagacattgaatggattagctttgatgaattt
gtaacttcggatgtggaaggctccttgcgagtatacaaggtcgatggcaaagctccggtt
tctacagtttctcatgcgcatgataattctattgttgctttacgatacaatctacgtatc
tctcttctattaactgcttctagtgataccactgttaagctttggtctagaggtgatgct
ggtgcttttgaatgtttacatgttttttcttttagctcaccggttaattgtattgactgg
aatttgcgggaagggacaccaattctagcggttgcttcaaacagtatcgtttctatgtat
aatgctatttcccttcagcaacttgctgtattcatgaggcatacagctcctgttagtgct
ttgagcttcagtcataacggtcgctatcttgctactggtgatacttctgggggagtatgt
atatggtcatgcaaaacagccaaactatttaaggaactgggttccgataactcagagtta
attgctgttactaatgtacttccagaggagcaagttaatttcttacggtggagttttgat
gataaagatttacttatcggtaaacaaaagaaggagattatttgttgttgtgatttttta
catgattctctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (35)   

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