KEGG   Schizosaccharomyces pombe (fission yeast): SPCC14G10.02
Entry
SPCC14G10.02      CDS       T00076                                 
Name
(RefSeq) putative ribosome biogenesis protein Urb1
  KO
K14861  nucleolar pre-ribosomal-associated protein 1
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spo03009]
    SPCC14G10.02
Ribosome biogenesis [BR:spo03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    SPCC14G10.02
SSDB
Motif
Pfam: Npa1 NopRA1 Creb_binding DUF1539 SH3_17
Other DBs
NCBI-GeneID: 2539162
NCBI-ProteinID: NP_587943
PomBase: SPCC14G10.02
Ensembl: SPCC14G10.02
UniProt: O74415
Position
III:742948..747870
AA seq 1568 aa
MESGSIDLDKEIDELSRVLLEHPAHVEKVLKTVEFDKSALRYIDAILDHHLKQIYRNLTS
NSPLHTLSLLQKMASWNNGLACVRVFQAIDWNSKIFIKMLQLPNQIQNSRKGNKRLKITI
SKKRSSLLLLFITFLRLGTPEIRLEILNSRKLTTPLFKGIYNDEPSVLKELLQCWLTYVL
LDHDVSRATKLSYFNEWSLSCLASLYSRDDEIDGISLCNLVHKFFVDACTVPGEGLCFVS
NGWHLQKKVDGQSKTIFNRVLQSFVFSLHVHTSTLQRELVLKILKACPDITASFIERNSL
TSEPVLSYQWISFVSLLQAILGMGIPFPFYDAETRTVPPTNIIIENILPSSFSKPVVLKA
LNGNDKFVCFLTVNTLLASFKRLESVLDEIKRSELSEDNKVELVSKISDAILLRLPDSQT
FVQLYSSTESDLLKEGLSRILLYFFTYFPENILKLKIDTSIFLRLDLSPGMLDRPFSRLH
VENIIQILRYLPEVKWFDVVRSPFVFLCLMYLQTSHSKLRDAIISTLNDVFSQTIIFCPS
LAVPPILTILASLQHTSPTQHKAVLEFLNSCINRCISRVFAYLDVCVDCFKKHSVNSQKK
TAPEVSPISVTLIEQIPFFLQKRDISDDSKDAVLSWLSDLFSNLVCTGEDANCLFHLLEN
VNVTAFDSDYTLKPFNQLMSFIESLAVQKLPDYVNQIGSLSQYLLYSTNDELSNSGIQKF
GMNLDFLPLYVVIITKRIAIMLQSGDMRVKKFLELIRELVEFSKEETMATSQSPIRTLLS
ACINLRPFLLQEQYISFNMDFAEFLIDTNASIKGSVVNTCVLDFLYKSFSDKVQENYNLI
RIAAKFMLLWTQEEFIGFSKALDSFLSENDDLIYKNLDYVAPLLFECMQFTSTTNANMFS
NNSISVLLKAAILKPTKLTHGMFDALNTMKPIISDFTVFEPALHTVENFDLTDCADEQIL
LLSSFVNFVPLFRKVIWNLLLNNKEALIQKYELLAILCCDLAKQYVAEQSQYDLERIRSF
CSEVVENNLDLVLQKSHLIELLFPLMKLSDPKIQYYVKVSNALSEKYLPQGVLELLVLLQ
KRIDIPSSLRVQTIMRIFAILTRVLSDSPQIGLSLEKFLTNFEALIKMNVDILRDEIDKS
TLNSFLESAIVHVTSFSNLRLCLTLAFTMTAEQCDSSRFLQMILAHEKNPLAGEDSSDEI
KATMSAIICKLTIIGKNYTLSVLDQILKLFKGRYTLHDSLLCELLAYFETLDDISVASRY
KGWVITDEYDMMLLARKDGSGVLEPKIAANTVNQYPSEWEKIDLKVFDDLETTEGLLSSY
CSNEWNREVYHPLYALGITASLLHSNQQVSNIQVIVQQNFLGMIVMGLSLFKEEARFACL
NFLRNFIPILDEQKFREKHLIKLVLASIIVNVPSSENRLSTLMANFYAFSLTVMMKPTHP
LFVGINRYYLQRQHVDVTDIPMYYELLYPSTDYTKSVYWLLTLLHAGLQTNQDLKIYLRR
HVFEMICTLYNSCVVNSEIRTLIEKILLKVVALGGGPMLVKYNAIYPMLQMVIPSFQETK
ENTVVSTT
NT seq 4707 nt   +upstreamnt  +downstreamnt
atggaatctggatctattgatttggataaggagatagatgaattgagcagggttttatta
gagcatcctgctcatgtggaaaaagttttaaagaccgttgagttcgataaatctgccctt
cgttatattgatgcaattttagatcatcatttgaagcagatatatcggaatttgacatcc
aattctcctttgcatacgctttctctacttcaaaaaatggcatcttggaataatggattg
gcatgtgttcgtgtattccaagctattgactggaacagtaaaatttttataaagatgctc
cagctacctaatcaaattcaaaattctaggaaaggaaataagcgtctcaaaatcactata
tcaaaaaagcggtcctctttactacttcttttcattacattccttaggcttggtacacca
gaaattcgactggaaatattaaattcaaggaaactaactactcctttgtttaaaggtata
tacaatgatgagccttcggttcttaaggagctacttcaatgttggctcacttatgtgtta
ctagatcatgatgtttctagggcaacaaaattatcttattttaatgaatggtcattgtca
tgcttagcttctctttattcaagagatgatgaaattgatggcatttccttatgcaatctt
gttcataaattttttgtcgatgcttgtacagtacctggtgaagggctttgcttcgtatca
aatggatggcatttacagaagaaggtggatggacaatccaaaactatttttaatcgtgtc
ttacagtcatttgttttttcattgcatgttcatacaagtactttacagcgggaattagtc
cttaaaatattaaaggcttgtccagatattacggcatcatttatagaaagaaatagtttg
acctctgaaccggtattatcttatcaatggatttctttcgtttcattactccaagcaata
cttggtatgggcattccttttcctttttacgatgcagaaacaagaacagttcctcctact
aatattataattgagaacatattgccttcttccttttcaaagcctgtagtccttaaagca
ttgaacggtaatgacaaatttgtctgttttttaacggtgaacactctcttagcgtcgttt
aaacgtttagagtctgtattggatgaaatcaaacgctctgaattgtctgaagataataaa
gttgaacttgtgtcaaagatatctgatgcaattttactacgtttacccgattctcaaact
tttgtacagctttattcttctacagaatcagatttgctgaaagaaggactttcaaggatt
ttactttattttttcacttatttcccggaaaacattttgaagttaaaaattgacacctct
atatttctacggttagatctttcgccgggaatgttagaccgtccattttcacgtttacat
gttgaaaatattatccaaattcttcgatatcttccagaagttaaatggtttgacgtagtt
aggtcaccttttgtcttcctatgcttgatgtatttacaaacaagtcactcaaagcttcga
gatgcaatcattagcacgttaaacgatgtctttagccaaactatcattttctgtccatcg
ctcgctgtccctcctattttgacgattttagcttctcttcaacacacatctcctacgcaa
cataaagcagttttagaatttttaaattcgtgtatcaaccgttgtatatctcgagttttt
gcttatttagatgtttgtgtcgactgttttaaaaagcactctgtgaattctcaaaaaaag
acggcgcccgaggtttcaccaatttcggtaacattaattgagcaaataccgttttttctt
caaaagcgtgatatttctgatgactcaaaggatgctgtgctctcttggttaagtgatttg
ttctctaaccttgtctgtacaggcgaagatgcaaattgtcttttccatctattggaaaac
gtaaacgttacagcatttgattccgattatactttaaagccttttaatcagctaatgagt
tttatcgaaagcttagctgttcagaaacttccagattatgtgaatcagataggaagcttg
tctcaatatctgctttattcaaccaatgatgagttatcaaactctggtatacagaagttc
ggcatgaaccttgacttcctaccactttatgttgtaattattaccaaaagaattgctatt
atgttgcaaagcggagacatgagagttaagaaatttttggaactcatacgcgaattagtc
gaattttctaaagaggaaactatggcaacttcgcagtcgccaatccggactttgctttca
gcatgcataaatttaagaccatttcttttgcaagaacaatatatttcattcaatatggac
tttgcagaattcttgattgatactaatgcgtcaataaaaggttcagttgtgaacacgtgc
gttttggactttttatacaagtcattttctgataaagtgcaagaaaactataatttaatt
cgtattgcagccaaatttatgctattatggacacaggaagaatttattgggttttccaaa
gctttggattccttcttatcagagaatgatgatttgatttataaaaatttggattatgtt
gctcctctgctttttgaatgtatgcagttcacttctactactaacgcaaacatgttttcc
aataactccatcagtgttttgctcaaagctgcgattcttaaaccaacgaaattaactcat
ggtatgtttgatgcactgaatacaatgaagcctattatctctgattttactgtatttgag
cctgccttacatacagttgaaaattttgatttgaccgactgcgctgatgaacaaattttg
ctgctatcttcttttgtgaatttcgtgcctctatttaggaaagttatatggaatcttttg
ttaaataacaaagaagctttaattcaaaagtatgaattgcttgccatattgtgttgtgac
cttgctaagcaatacgttgctgaacaatctcaatatgatttggagagaatccgttccttt
tgttccgaggttgttgaaaacaacttggatcttgttttgcaaaaatctcatttgattgaa
cttttgttccctcttatgaaattgagtgatcccaaaatacaatattatgtgaaagtgtct
aatgccttatctgaaaaatacttgccccaaggagtattagaacttctagttcttcttcaa
aagcgcattgacattccgagctctttgagagttcaaacaattatgcgaatatttgctatt
ctcacaagagttttgtccgatagtccacaaattggcttgagtttagagaaatttttaacc
aacttcgaagctctcattaaaatgaatgttgacattcttagagatgaaattgataagtct
accttaaacagttttttggagtctgccattgtgcacgttacttcattttcgaatcttcgt
ctttgtcttacgcttgcctttactatgactgctgagcaatgtgattcttcacggttttta
caaatgattttggcacatgagaaaaatcctctagctggtgaagatagttcggatgaaatc
aaagcaactatgtctgcgatcatatgtaagcttacaataataggcaaaaattacacctta
tcagtattagaccaaatattgaaactttttaaaggtcggtatactcttcatgattctcta
ctttgtgaattactggcctactttgaaactttggatgatattagcgtcgcaagtcgatat
aaaggttgggtaataactgacgaatacgatatgatgcttcttgctcgtaaggacggttca
ggggtactggaacctaagattgctgctaatactgtcaatcaatatccatcagagtgggag
aagattgatttgaaggtgtttgacgatttggaaactaccgaagggctcctttctagttac
tgtagtaatgaatggaatagagaagtctatcatccactatatgctcttggtataacggca
tcccttcttcattcgaatcagcaggtttctaacattcaagttattgtacaacaaaacttc
ctcggtatgatagtaatggggctttctctttttaaagaagaagcacgctttgcttgtctt
aatttcctacgaaattttatacccattctggacgaacaaaaatttagagaaaagcattta
attaaactagtacttgctagtataattgtgaatgtaccttcttcagaaaatcggttgagc
acgttaatggctaacttttatgctttcagcttgaccgtcatgatgaaaccgacacatcca
ttatttgtaggaattaatcgttattacctgcaacgtcaacatgttgatgttacagatata
ccgatgtactatgaattactttatccatcaacagattacaccaaaagtgtttactggcta
ctgactctattacatgctggtttacaaacaaatcaggatttaaaaatatatcttcgacga
cacgtatttgaaatgatatgtactttatacaactcatgtgtagtcaacagtgaaatccga
acactaatcgaaaaaatattgctcaaggttgtggcattgggaggaggcccaatgttggtt
aaatacaatgcaatataccctatgctacaaatggtcataccaagttttcaagaaacaaag
gaaaataccgtagtatcgaccacgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (68)   

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