KEGG   Schizosaccharomyces pombe (fission yeast): SPCC1827.04
Entry
SPCC1827.04       CDS       T00076                                 
Name
(RefSeq) ankyrin-repeat protein
  KO
K26089  ankyrin repeat and zinc finger domain-containing protein 1
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spo03009]
    SPCC1827.04
Ribosome biogenesis [BR:spo03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    SPCC1827.04
SSDB
Motif
Pfam: bVLRF1 Ank_5 Ank Ank_2 Ank_4 Ank_3
Other DBs
NCBI-GeneID: 2539188
NCBI-ProteinID: NP_001342733
PomBase: SPCC1827.04
Ensembl: SPCC1827.04
Position
III:2382309..2384707
AA seq 600 aa
MGDISKHNIFSLPEDILAKLELREEYSVEEKTDSANLSNQGDIVDSTQKNISSCVNCQID
NLHTLDERKSHIKSDWHRFNTKRKITKLPPVSQDEFESIIEDLPESLSGSESETNSESEE
DNFQIEKAFKQSLNIGKVDSADENNNQRTNSPLTWFQLSNASAEVPTYIGVYKHMFSGNN
HITKDLLVQQQNHNRQKPLQLAMFMVGGGHFAAMIASNEFNPRDPHVPKVLAQKTIHRYT
TRRKQGGSQGAADNTKGNIHSAGSGLRRYNEQALIKDIQQVFKDWGKLLETCDLIFVRAI
GSSNRSIFFSQPGALISPKDPKLRVFPFTTKRATHSELLRCYKELVTPKISHVDSISIKA
QEEERKRQAEIEKEIRQSRLQEEERKKKKLAKYTEVIISNLKASNIEAFLEYLRSNDLSI
NFQFYPKNVHLHTSTPLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEISTGNKEVK
DEFLIARHELGESFFDWEAAKVGAPQSREQIQKQRQKAKTKLENQRRDKERQEELRRKEA
MQKIEEQSKRDYDKLHGEGHSLGINNVRKVDELQSLSPEMRMRIEREKRAAAAMKRMQTK
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgggtgatatttcgaagcacaatattttttcccttcctgaggatatcttagcaaaacta
gaactacgagaggaatactcagttgaggaaaaaactgatagtgctaatttgtcaaaccaa
ggcgatattgttgattccactcagaaaaatatatcatcatgtgtcaattgccagattgac
aatctgcatactctggacgaaagaaaaagtcatattaaatctgactggcataggttcaat
acgaagcgaaaaattacaaaattgcctccggtttctcaagacgaatttgaaagcataatt
gaagatttaccagaatcactgtctggcagtgaaagcgagacaaactcagaatccgaagaa
gataatttccaaatagagaaggcttttaaacaatccttgaacataggaaaagttgactcc
gctgacgaaaacaacaatcagcgaacaaactcaccattaacgtggtttcaattgagtaat
gcttctgccgaagtgccaacctatattggtgtatataaacacatgttttccggtaataac
catatcactaaagatttacttgttcaacaacaaaatcataaccgacaaaagccacttcaa
ctagctatgtttatggttggaggcggtcattttgctgctatgattgcttctaatgagttt
aatcctcgtgatccccatgtacccaaagtactagcacagaaaactattcacagatataca
actagaaggaagcaaggtggttctcaaggggctgctgacaatactaaagggaacattcac
tcggcaggtagtggtttgcgacgttataacgaacaagctcttattaaagatattcagcaa
gtttttaaagactggggaaaattattagaaacatgcgatttaatctttgtacgtgcaatc
ggttcatctaatcgttcaattttcttctctcaaccaggtgctcttatttctccaaaagat
ccaaaactccgcgtatttccatttactactaaacgagccacacattcagaattacttcgt
tgttacaaagagttggttactccgaaaattagtcacgttgattcaatttcgataaaagct
caagaagaagaacgaaagagacaagccgaaattgaaaaggaaattagacaaagcagatta
caagaggaagagaggaaaaagaaaaagcttgctaaatataccgaagtaattatctccaat
ttgaaagcgtctaatattgaagcatttttggaatatttgcgctctaatgatttgtctata
aattttcaattttatcctaaaaatgttcatttgcacacatctacaccgttgcattacgca
gttacccaaaaaaatgctaaattagtcgctaaacttctccgtaatggtgctgatccagca
atgctaaatgggaacggaaagacaccttttgagattagtactggaaacaaagaggttaaa
gatgagtttctaattgcaaggcatgagttgggagagtcatttttcgactgggaagcagct
aaagttggggctcctcagtctagagaacaaattcagaaacaacgccaaaaggcaaagacc
aaattagaaaatcaaagaagggataaagagaggcaagaagaacttagacggaaggaagcg
atgcagaaaattgaagaacaatcgaaaagggattatgataaactgcacggcgaaggtcat
tcattaggaattaataatgttcgaaaagttgacgaattgcaatcattaagtccagaaatg
agaatgcgaattgaacgtgaaaaaagggctgcagctgccatgaaaagaatgcaaacaaaa
tga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (48)   

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