KEGG   Schizosaccharomyces pombe (fission yeast): SPCC18B5.06
Entry
SPCC18B5.06       CDS       T00076                                 
Name
(RefSeq) putative translation release factor eRF1 family protein
  KO
K06965  protein pelota
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SPCC18B5.06
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    SPCC18B5.06
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     SPCC18B5.06
SSDB
Motif
Pfam: eRF1_1 eRF1_2 eRF1_3
Other DBs
NCBI-GeneID: 2539371
NCBI-ProteinID: NP_587936
PomBase: SPCC18B5.06
Ensembl: SPCC18B5.06
UniProt: Q9USL5
Structure
Position
III:729054..730829
AA seq 390 aa
MKLIQKNIEKNGSGWITMCPEEPEDMWHLYNILQVGDQLKASTVRRVVKVGATGSTSGSR
VVMKLRILVENMDFDTKAAQLHIKGRTTEYHPEVKMGSYHTLDLELHRNFTLYKNEWDAF
ALDRVDAACNPSRNAEIGAVVLDEGLANICLITDYMTILRQRIDQVIPRKRRGDSSAYQK
GLDKFYDSVFQSINSEFDFDKLKVVILASPGFVARGLYDYIFSMAVKLDLKQIVKSKNKF
VILHSSTGHIHSLNEILKDPAVESKLADTKYVQEIRVLNKFYDVMNEDDRKAWYGPNHVL
KAFELGAIGELLISDSLFRSSDIATRKKWVSLVEGVKEINCPVYIFSSLHESGKQLDLLS
GIAAILTYPVDEEDISEDEEDEESQNFEHS
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgaagttgattcaaaaaaacatcgaaaaaaatggctccggatggataaccatgtgccct
gaagagccagaagatatgtggcatttgtataatattcttcaagttggagatcagctgaag
gcttctacagttcgtcgtgtagtgaaagttggcgctacaggaagtacgtcaggttcaaga
gttgtgatgaaactacgtattttagttgagaatatggactttgatacaaaggctgctcaa
ttgcacatcaaaggacggacaactgaataccatcctgaagttaagatgggatcctaccat
accttggacttagaactacatcgcaattttactctatataaaaatgaatgggatgcattt
gcattggaccgtgtagatgctgcttgtaatccttcaagaaatgctgaaataggtgctgtg
gttttagatgaaggtcttgccaatatttgtctcattacagattatatgaccatcctgcgt
caaaggattgatcaagtgattccaaggaaacggagaggggacagcagcgcttaccaaaag
ggccttgataaattttatgactctgtttttcaatccattaactcagaatttgattttgat
aaattgaaagtcgttattcttgcttcaccaggatttgtggctcgaggcttgtatgactac
atattcagcatggccgtgaagttagacttgaaacaaattgttaaatcaaagaataaattt
gtcatccttcattctagcactggtcatattcattcccttaatgaaattttgaaggaccct
gctgttgaatcaaaactagccgacacaaaatacgtacaagaaattcgcgttctgaataaa
ttttacgatgtcatgaatgaagatgatagaaaggcatggtatggtccaaatcatgttttg
aaggcttttgaacttggcgcgatcggagaacttctgattagcgattctctgttcaggagt
tctgacattgctactagaaaaaaatgggtttcattagtagaaggtgttaaggagattaac
tgtcctgtttatattttcagtagtttgcatgagtcagggaagcagctggatctgttgtca
ggtattgccgccattctcacttacccagtcgatgaagaggatatatcagaagatgaagag
gatgaggaatcccaaaattttgaacatagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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