KEGG   Schizosaccharomyces pombe (fission yeast): SPCC4G3.15c
Entry
SPCC4G3.15c       CDS       T00076                                 
Symbol
not2
Name
(RefSeq) putative CCR4-Not complex subunit Not2
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPCC4G3.15c (not2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    SPCC4G3.15c (not2)
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SPCC4G3.15c (not2)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     SPCC4G3.15c (not2)
SSDB
Motif
Pfam: NOT2_3_5_C NPR1_interact
Other DBs
NCBI-GeneID: 2538778
NCBI-ProteinID: NP_587823
PomBase: SPCC4G3.15c
Ensembl: SPCC4G3.15c
UniProt: P87240
Position
III:441550..442914
AA seq 306 aa
MSLANRLSHLNITGGNDFKASIGPSVGRQNEATNPWSSTSHSLENSAATVVNELQTTKEQ
KTPEQSTTANPLFPGNDFSDFNNHKSKLLGVITGKSTPSSQAEKSDTTNSKTGSTEELTE
TPADENAKQYMLESLLPIIRMEDSEMSTLQLGCDLAALGFDLAPVEEDRLISTNLFSPWA
ELNTKKPVSQPMFKLPACYKNVNPPPAISKIFQFSDETLFYIFYTMPRDVMQEAAAQELT
NRNWRFHKELRVWLTPVPGMKPLQRTPQFERGYYMFFDPIHWKRIKKDFLLMYAALEDRA
QSAVHS
NT seq 921 nt   +upstreamnt  +downstreamnt
atgagccttgcaaataggttgtctcatttaaatataaccggaggcaatgattttaaagct
tcaatcggcccttctgttggaagacagaacgaagctacaaacccctggtcttctacatca
cattcattagagaactcagctgctacggttgttaatgaattgcagaccacgaaagagcag
aaaactcctgaacaatccactactgcaaatccgctcttccccggaaatgatttttctgat
ttcaataatcacaaaagtaagctattaggagttattactggaaaatctactcctagttct
caggctgaaaaatctgataccacaaactcaaaaactggatccacagaagagttgactgag
acgccagctgatgaaaatgcaaaacagtacatgttggaatccctgttacccataattcgt
atggaggatagtgaaatgtcgacgttgcagttaggatgtgatttggctgccttgggtttc
gacttggctcctgtagaggaggaccggcttatttcgacaaatctcttttcaccatgggct
gaactcaatacaaaaaaaccagtctcccagcccatgttcaaattacctgcatgttacaaa
aacgttaatccacctccagccatttctaaaatttttcaattttctgatgaaactttattt
tatatattttacacaatgcctcgagacgttatgcaagaagctgctgctcaagaattaaca
aacagaaattggcgatttcacaaggaacttcgtgtttggttaacaccggtccctggaatg
aaaccgttgcaacgcactcctcagtttgagcgtggttattacatgttctttgatccgatt
cattggaaaaggattaaaaaggactttttattaatgtatgctgcgctcgaagatcgtgct
cagagtgctgtgcacagttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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