KEGG   Schizosaccharomyces pombe (fission yeast): SPCC550.05
Entry
SPCC550.05        CDS       T00076                                 
Symbol
nse1
Name
(RefSeq) Smc5-6 complex non-SMC subunit 1
  KO
K22817  non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spo04121]
    SPCC550.05 (nse1)
   03400 DNA repair and recombination proteins [BR:spo03400]
    SPCC550.05 (nse1)
Enzymes [BR:spo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     SPCC550.05 (nse1)
Ubiquitin system [BR:spo04121]
 Ubiquitin ligases (E3)
  Atypical E3
   SPCC550.05 (nse1)
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     SPCC550.05 (nse1)
SSDB
Motif
Pfam: SMC_Nse1 Peptidase_S41_N Mga zf-RING-like LexA_DNA_bind HTH_IclR
Other DBs
NCBI-GeneID: 2539550
NCBI-ProteinID: NP_001343010
PomBase: SPCC550.05
Ensembl: SPCC550.05
Position
III:1193982..1196023
AA seq 232 aa
MEKERQDGLSDKHKFILQYIMCRTAGVDNEQVRELVQEQYGETATVEDVINELNNSLHNF
DFKIKRVQDQLDGRLTLHFQNLSGDPVSQMATPYPPVQIELMRKIIEWIMKCDDYQYSLT
TLQIQKLSRKEMGLAPSVIESHLHTFERDGWLRQREGIWTFTNHALAELDAYLHNEYESN
LYECNACREIVIAGYVCDCGYCLHVYCCKHLAHVNCINCNTPWANATVIGRW
NT seq 699 nt   +upstreamnt  +downstreamnt
atggagaaagagagacaagatggattatctgacaagcataaattcattcttcaatatata
atgtgtcgcacagctggtgttgataatgaacaagttcgtgaacttgttcaagagcagtat
ggagaaacggcaactgtagaagatgtaataaatgaattgaacaattctttgcacaatttc
gattttaagataaaacgagtacaggatcaactggatggaagattaacgctgcactttcag
aatttatctggagacccagtatcccaaatggctactccttaccctcctgttcagatagaa
cttatgagaaagataatcgaatggatcatgaagtgtgatgattaccaatattcattaacg
actctgcaaatccaaaaattatcgagaaaagaaatgggattggcacctagtgttattgag
tctcacttacatacgtttgaacgtgatggatggctaagacagagagagggtatttggaca
tttacgaatcatgcgttagctgaattggatgcttatttacacaacgaatacgagagcaat
ttatacgaatgcaacgcttgtcgcgaaattgtaattgctggatatgtatgtgattgtggc
tactgcttgcatgtttactgttgcaagcatttagctcatgttaattgtataaattgtaac
acgccatgggcaaatgcgaccgttataggacgctggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (37)   

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