KEGG   Schizosaccharomyces pombe (fission yeast): SPCC663.03
Entry
SPCC663.03        CDS       T00076                                 
Symbol
pmd1
Name
(RefSeq) leptomycin efflux transporter Pmd1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:spo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    SPCC663.03 (pmd1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:spo02000]
    SPCC663.03 (pmd1)
   04147 Exosome [BR:spo04147]
    SPCC663.03 (pmd1)
   04090 CD molecules [BR:spo04090]
    SPCC663.03 (pmd1)
Enzymes [BR:spo01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     SPCC663.03 (pmd1)
Transporters [BR:spo02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    SPCC663.03 (pmd1)
Exosome [BR:spo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   SPCC663.03 (pmd1)
CD molecules [BR:spo04090]
 Proteins
  SPCC663.03 (pmd1)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_21 RsgA_GTPase Zeta_toxin AAA_30 AAA_29 AAA_22 AAA_23 AAA_16
Other DBs
NCBI-GeneID: 2538709
NCBI-ProteinID: NP_001342744
PomBase: SPCC663.03
Ensembl: SPCC663.03
Position
III:1634987..1640571
AA seq 1362 aa
MSLHSKKSTSTVKDNEHSLDLSIKSIPSNEKNFSTEKSENEASESHVVDVVKDPFEQYTP
EEQEILYKQINDTPAKLSGYPRILSYADKWDIMLQLAGTITGIGAGLGMPLMSLVSGQLA
QAFTDLASGKGASSFQHTVDHFCLYFIYIAIGVFGCSYIYTVTFIIAGERIARRIRQDYL
HAILSQNIGYFDRLGAGEITTRITTDTNFIQDGLGEKVGLVFFAIATFVSGFVIAFIRHW
KFTLILSSMFPAICGGIGLGVPFITKNTKGQIAVVAESSTFVEEVFSNIRNAFAFGTQDI
LAKLYNKYLITAQRFGINKAIAMGLMVGWMFFVAYGVYGLAFWEGGRLLHAGDLDVSKLI
GCFFAVLIASYSLANISPKMQSFVSCASAAKKIFDTIDRVSPINAFTPTGDVVKDIKGEI
ELKNIRFVYPTRPEVLVLDNFSLVCPSGKITALVGASGSGKSTIIGLVERFYDPIGGQVF
LDGKDLRTLNVASLRNQISLVQQEPVLFATTVFENITYGLPDTIKGTLSKEELERRVYDA
AKLANAYDFIMTLPEQFSTNVGQRGFLMSGGQKQRIAIARAVISDPKILLLDEATSALDS
KSEVLVQKALDNASRSRTTIVIAHRLSTIRNADNIVVVNAGKIVEQGSHNELLDLNGAYA
RLVEAQKLSGGEKDQEMVEEELEDAPREIPITSFGDDDEDNDMASLEAPMMSHNTDTDTL
NNKLNEKDNVVFEDKTLQHVASEIVPNLPPADVGELNEEPKKSKKSKKNNHEINSLTALW
FIHSFVRTMIEIICLLIGILASMICGAAYPVQAAVFARFLNIFTDLSSTDFLHKVNVFAV
YWLILAIVQFFAYAISNFAMTYAMEAVLQRIRYHLFRTLLRQDVEFFDRSENTVGAITTS
LSTKIQSLEGLSGPTLGTFFQILTNIISVTILSLATGWKLGLVTLSTSPVIITAGYYRVR
ALDQVQEKLSAAYKESAAFACESTSAIRTVASLNREENVFAEYCDSLIKPGRESAIASLK
SGLFFSAAQGVTFLINALTFWYGSTLMRKGEYNIVQFYTCFIAIVFGIQQAGQFFGYSAD
VTKAKAAAGEIKYLSESKPKIDTWSTEGKKVESLQSAAIEFRQVEFSYPTRRHIKVLRGL
NLTVKPGQFVAFVGSSGCGKSTTIGLIERFYDCDNGAVLVDGVNVRDYNINDYRKQIALV
SQEPTLYQGTVRENIVLGASKDVSEEEMIEACKKANIHEFILGLPNGYNTLCGQKGSSLS
GGQKQRIAIARALIRNPKILLLDEATSALDSHSEKVVQEALNAASQGRTTVAIAHRLSSI
QDADCIFVFDGGVIAEAGTHAELVKQRGRYYELVVEQGLNKA
NT seq 4089 nt   +upstreamnt  +downstreamnt
atgtctttgcatagtaaaaaatccacttctacggttaaggataacgaacattctttggac
ctttctatcaaaagcataccttcaaatgaaaaaaacttttcaacagagaaaagcgagaat
gaggcttctgaaagccacgtggtagatgttgtcaaagatccttttgaacagtatactcct
gaagaacaagaaatcctttacaaacaaattaatgacacacctgccaaactttctggatac
cctagaatcctttcatacgccgataaatgggatattatgctgcaattggcaggcaccatt
actggtattggtgccggcctgggtatgccattgatgtcccttgtatccggtcagctggct
caagcttttaccgaccttgcctctggcaaaggagcgtcatctttccaacacactgtagat
cacttttgtctttattttatttacatcgcaattggtgtctttggctgttcatatatttac
actgtaacctttattattgcaggagagcggattgcccgtcgtattcgacaagattatttg
catgccattctttcccaaaatatcggttatttcgatcgtctaggtgccggtgaaattacc
actcgaattactactgatacaaactttattcaagatggtttaggtgagaaggtcggattg
gtgttctttgcaatagcaacctttgtatctggttttgttatcgcttttattcgtcattgg
aagttcacattgatattgagttcaatgtttccagccatttgtggtggtatcggcttgggt
gttccctttattaccaaaaacaccaaaggtcaaatcgccgtcgttgccgaatccagtaca
tttgtggaagaagtgttttccaatatcagaaatgcttttgcttttggtacccaagatatt
cttgcaaaattgtacaataagtacttaataactgcacaacgcttcggtatcaataaggca
attgcaatgggtttaatggttggatggatgttctttgttgcgtatggtgtttacggtctt
gcattttgggaaggtggacgcctcctacatgcaggtgatttagatgttagcaaattaatt
ggctgctttttcgccgtccttattgcttcctatagtttggccaacatttctcctaagatg
cagtcatttgttagttgtgcctcagccgctaaaaagattttcgacacaattgatcgtgtt
agtccaattaatgcttttacacctactggtgatgtagtcaaagatattaaaggggagatc
gaattgaaaaatattcgatttgtttatcctactcgtcctgaagttttagtgctggataac
ttttctttggtatgcccttctggtaaaattactgctttagtaggtgccagtggtagcggc
aaatccacgatcattggacttgttgagcgattttacgaccccattggtgggcaggttttc
ttagatggtaaagaccttagaacgctgaacgttgcttcgctgagaaatcaaatatctttg
gtacaacaagaaccggttctgtttgctacaactgtgtttgaaaatataacttatggcctg
cctgatacaattaaaggtaccttgtctaaggaagaattggaaagaagagtttatgatgcc
gctaagcttgccaacgcttacgactttattatgacattacccgagcaattttcaactaat
gttggacaacgcggtttccttatgtcaggaggacaaaaacaaagaattgcaatcgctagg
gccgttattagtgatcccaagatcttattgttggacgaagccacaagtgctttagactct
aagagtgaagtgcttgttcagaaagctctagataatgcatcgagatctcgtaccactatc
gttattgctcatcgtctttctacaattcgtaacgctgataatattgtcgtagtgaatgca
ggaaaaattgttgaacagggctcccacaatgaattgttagatctgaatggtgcttatgct
agactagtagaagctcaaaagctatcaggtggagaaaaagaccaggaaatggtcgaggaa
gaactggaggatgctccgagggaaatacccataacgtcttttggtgacgatgatgaagat
aatgatatggctagcctcgaggcccctatgatgtcccataatacggatactgatacgttg
aataataaactcaacgagaaagataatgtcgtgtttgaagacaaaacccttcagcatgta
gcttccgaaattgttccaaacctacctcctgcagatgtcggtgaacttaatgaggagcct
aaaaagtccaaaaagtcaaagaaaaacaaccatgagattaattcgttaacagcgttatgg
ttcattcattcttttgtacggacaatgatagagattatttgtctattaattggtattttg
gcttctatgatttgtggtgcagcttaccctgttcaggcagctgtttttgcaagatttctc
aatatcttcactgatctctcatccacagactttttacacaaagtaaacgtgtttgctgtt
tattggcttattctagctattgttcaattcttcgcttatgcaatttccaattttgcaatg
acttatgcaatggaagcagttttgcaaagaattcgttatcatctatttcgaacattgctt
cgtcaagatgttgagtttttcgaccgtagtgagaacacagttggtgctattactacttct
ttatcaacgaaaattcagtctttggagggattgagcggcccgactttaggaacctttttc
caaattttgaccaatatcatttcagttacgattttatctttggctacaggatggaagttg
ggtttggtgaccctttcgacctcccctgttatcattactgctggttattaccgtgtacgt
gctcttgatcaagtccaagagaagttgtctgctgcctacaaagagtcagctgcgttcgca
tgcgagtcaacttcagccattcgtacagtcgctagtcttaatcgcgaagaaaacgttttt
gctgagtattgtgattctctcatcaaacctggccgtgagtcggcaatcgcatcattgaaa
tctggtttattcttttctgctgctcaaggtgttacctttttgattaacgcattgacattt
tggtatggttctaccttaatgcgcaagggcgaatataacatcgttcagttttatacttgt
tttattgcaattgtctttggtatacaacaagctggtcaattctttggttactcagcagat
gtaacaaaagcaaaggctgctgccggtgaaattaagtatttgtccgaatcaaaacctaaa
attgatacatggtcgacggaaggaaagaaagttgaatcccttcaaagtgcagcaattgaa
ttcaggcaagttgaatttagttaccctaccagaaggcatattaaagttcttcgtggtttg
aacctcactgtgaagcccgggcagtttgtcgcattcgtaggatcttctggctgtggtaaa
tctacgaccattgggcttatcgagcgtttctacgattgcgacaatggagctgtattggtg
gacggtgttaatgttcgtgactataacattaacgactaccgcaaacaaattgcccttgtc
tctcaagagccaacgttgtaccaaggtactgttcgtgagaacattgttttgggcgcatct
aaagatgtctctgaagaagagatgattgaagcttgcaagaaggccaatattcatgagttt
attcttggattgcccaacggttataacacactttgcggtcaaaagggctcttccttatct
ggtggtcaaaaacagcgtattgccattgctagagcattaattagaaatccaaagattctc
cttttagatgaagcaaccagtgctttagacagtcatagcgaaaaggtcgttcaagaagct
ttaaatgccgcctctcaaggtagaaccacggtagcaattgctcatcgtttgtcttctatc
caagatgcagactgtattttcgtatttgatggtggtgttatcgctgaagctggtactcat
gccgagcttgttaaacagcgcggtcgttactatgaacttgtggttgaacagggattgaac
aaagcataa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (70)   
   KEGG ORTHOLOGY (1)   
   RefGene (61)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (92)   

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