KEGG   Shewanella polaris: FH971_04400
Entry
FH971_04400       CDS       T06579                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10943  two-component system, response regulator FlrC
Organism
spol  Shewanella polaris
Pathway
spol02020  Two-component system
spol02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:spol00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FH971_04400
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FH971_04400
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:spol02022]
    FH971_04400
   02035 Bacterial motility proteins [BR:spol02035]
    FH971_04400
Two-component system [BR:spol02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   FH971_04400
Bacterial motility proteins [BR:spol02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    FH971_04400
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_5 HTH_8 AAA_2 AAA_16 AAA_19 AAA AAA_22 MCM
Other DBs
NCBI-ProteinID: QDE30278
UniProt: A0A4Y5YCH6
Position
1005887..1007182
AA seq 431 aa
MDNLTIRLVDFELSKSTKISLEHQGFKLWQTGQELPWLTIINLSQYQPTALAQHLKQFPS
KNYLALLAPEQGELAATAMQIGVQDYLLLPLEDNPLFSSIERLHRLEQPDSQIIAAAPIS
KQLLMLAHRAASTEASILLTGESGTGKEPLANYIHRHSSRAGKPFVAINCAAIPETMLES
ILFGHTKGAFTGASADKAGKFEQANGGTLLLDEIAEMSLILQAKLLRVLQEREVERLGGN
QSITLDIRVIASTNKDLRMAVDAGEFREDLFYRLDVLPLKIAPLRERKADVLPLAEHFLQ
YYGQHDITTYFSPQAQHALIDHDWPGNVRELENCIQRGLMMRRGQTIQAIDLGFTLVPES
CANNSTQGLKQSKRQAEFQFIVDILRKVQGSRSQTAAELGMTTRALRYKLVQMRDAGIDV
DQLLQRSGNAA
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggataacctaacgatacgtcttgtcgattttgagctgtctaaatcgacaaaaataagt
cttgaacaccaaggttttaaactttggcagacagggcaagaactgccttggcttaccatc
attaatttatcgcaatatcaaccaacggcgcttgctcagcatttaaaacagttccccagt
aaaaactatcttgcattgttagccccagaacaaggagagttagctgctactgcaatgcaa
attggtgtgcaagattatctattactcccattagaagataacccattattttcatcgatt
gaacgtttacatcggcttgaacaacccgactcacaaattattgcagcggcaccaatcagc
aagcaattactgatgctcgcgcacagagccgcttctacagaagccagcattctattaaca
ggggaaagtggtacaggtaaagaaccattagctaattatattcatagacattcaagtaga
gcgggcaaaccgtttgtggctattaattgtgcggcaattcctgaaactatgcttgagtcc
attctatttggtcacacaaagggagcttttaccggagcgagtgcagataaagccggtaaa
ttcgaacaagctaatggtggtacgttattattagatgaaatagctgaaatgtctttgatt
ttacaagctaaattattaagggtactccaagaaagagaagttgagcggttaggagggaac
caatctataacgcttgatataagagtgatcgcatctaccaataaagacttaagaatggcg
gttgatgctggagagtttcgtgaggatttattttaccgccttgatgtattgccattaaaa
attgctcctcttagagagaggaaggctgatgttttgcctctagctgaacatttcttacaa
tattacggtcagcacgatattactacatattttagccctcaagcacaacatgcgctgata
gatcatgattggcctggtaatgtaagggaacttgaaaattgtattcaacgtggacttatg
atgcgccgcggacaaactattcaagcaatagatcttggatttactttagtgccagagagt
tgtgctaataacagcacacaagggctaaaacagtcaaaacgccaagcagaatttcaattt
attgttgatattctgcgtaaagttcagggtagtcgcagtcaaaccgctgcagaactgggt
atgactactcgggcattaagatacaagttagtgcaaatgcgtgatgcaggtatcgatgtc
gatcaattattacaacgctcaggcaatgccgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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