KEGG   Sporosarcina sp. P37: SporoP37_06695
Entry
SporoP37_06695    CDS       T04826                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
spop  Sporosarcina sp. P37
Pathway
spop02020  Two-component system
spop02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:spop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SporoP37_06695
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SporoP37_06695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spop03021]
    SporoP37_06695
Transcription machinery [BR:spop03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SporoP37_06695
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR LIM_bind HTH_Crp_2 MarR
Other DBs
NCBI-ProteinID: ARK24384
UniProt: A0A7U5GVT1
Position
complement(1278836..1280116)
AA seq 426 aa
MEMVLRQKQELGLHMTTELRQAIELLQLCTYDLEQYIREQELENPLIELTEPKLDHSFEE
RITRSYASSESDSQEWVKQDEEGKRDQLIQQINVNFPDEKTKQFLKRLIHSLDDNGYLSA
EMQSVTGVEKGIELLQQIGPPGIGARNLRECLLLQARQSEDCPEFAETFIADYLPLVADR
KWQDIARGMNITMPHVKELYDFLLTLNPRPCPELANTKTEFMVPDVIVEEKQGKLTFHLN
DQELPKISLRKEYVSSLKGKSELSNYLQGYHKQAQWLLTSIEQRRTTMIRIVTDLLEKQQ
TFFRQGREALQPMTLKDIADSIEMHESTISRAVSNKVIQTPAGTFEMRSLFTSKLAAQNG
ESVSQSSVKAALKALVADEDKRKPLSDQKIADFFLKEQGVTISRRTISKYREELQIPPSS
KRKSIL
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggagatggtccttcggcaaaagcaggagttgggtctgcacatgacaacagagcttcgc
caggctattgagttgctgcaattatgcacatatgacttggaacaatatattcgggagcag
gaactggaaaatcctcttattgaattaacagagccaaaactagatcattcatttgaggaa
cggatcacccgatcgtatgccagttcagaatctgattcacaagaatgggtgaagcaggat
gaagaggggaaacgtgaccagctgattcaacagataaatgtcaattttcctgatgagaaa
acgaagcaatttctgaagcggctgattcacagcctggatgacaacggctatctatcagca
gaaatgcagtcagttacgggagtggaaaaaggaattgaattgctgcagcaaattggtccc
cctggcatcggtgcgcgcaatttgcgggaatgtctgctgctgcaggccaggcagagcgag
gattgtcctgaatttgctgaaacgttcattgcggattatttaccgcttgtggcggacagg
aaatggcaggatattgcgagagggatgaatatcacaatgcctcacgtgaaggaattgtat
gactttttattaacgctgaatcccagaccatgcccggagcttgcaaatacaaagacggaa
tttatggttcctgatgtgatcgtagaagaaaaacaaggcaagctgacgtttcatctgaat
gatcaggaactgccaaagatcagtctgcgcaaggaatatgtatcttcactgaaagggaag
tctgaactttctaactacctgcaaggctatcataaacaggcgcaatggttattaacgagt
atagaacagaggcgcactacgatgatccgtatcgtcacggatcttctggaaaaacagcaa
acatttttccggcaaggccgtgaagctttacagcctatgacattaaaagatattgcagac
agtatcgaaatgcatgaatcgacaatcagtcgggcggtgtcgaataaagtaatacaaaca
ccagcgggaacttttgaaatgcgttcattatttacgtccaagcttgcagcgcaaaacgga
gaaagtgtttcgcaatcgtctgtcaaagcagcgctgaaagcactcgtggcagatgaagat
aagcgaaagcctttatccgatcaaaaaattgccgactttttcttaaaggagcaaggagtg
acaatttcacgcaggacgatcagtaagtaccgggaagaattgcagattcccccatccagt
aaaagaaagtcaatcttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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