KEGG   Sporosarcina sp. PTS2304: DV702_07405
Entry
DV702_07405       CDS       T05572                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
spos  Sporosarcina sp. PTS2304
Brite
KEGG Orthology (KO) [BR:spos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spos03016]
    DV702_07405 (thpR)
Enzymes [BR:spos01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     DV702_07405 (thpR)
Transfer RNA biogenesis [BR:spos03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    DV702_07405 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: AXH99591
UniProt: A0A345NX33
Position
1574648..1575214
AA seq 188 aa
MGGELNLAQHYFIGISIAQNVVDIAEHFRETYQLREKYKVIPHAEDLHITMRYIGELRDD
HKASLSYELGKIAKDHTCFTTSITGLSFFGSPSGPRVVFLSVDAVSALCDLQRRIARRTE
KIVGLERSIRFLPHITIAKKRKILDKMQFIKEVIPPVPIEINGFTLFAIHPGKSPSYETI
MYFPLKKS
NT seq 567 nt   +upstreamnt  +downstreamnt
ataggaggtgagctgaatttggcacaacattattttatcggcatctccattgcccaaaac
gtagtcgacatcgctgaacattttagagagacctatcagttacgagagaaatataaagtt
attccacacgccgaagacttgcacataacaatgcgatatattggcgagttacgcgatgat
cacaaagcgtccctttcatatgagttaggtaaaattgccaaagatcatacttgttttact
acgtccatcacagggttgtcttttttcggatcaccgtcaggaccgcgagttgtatttttg
tcagtcgatgccgtcagcgcactctgtgatttacagcggcgaatcgccagacgaacagaa
aaaatagtaggactagaacggtcaattcgattccttccgcatattactattgcaaagaag
cgtaaaatattggataaaatgcaatttattaaagaagtgatcccaccagttccaatagag
atcaatgggtttacattattcgctattcatccaggaaaaagtccatcttatgaaaccatt
atgtactttccattgaaaaagagctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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