KEGG   Streptococcus pneumoniae R6 (avirulent serotype 2): spr0215
Entry
spr0215           CDS       T00060                                 
Symbol
rpoA
Name
(GenBank) RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
spr  Streptococcus pneumoniae R6 (avirulent serotype 2)
Pathway
spr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:spr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    spr0215 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spr03021]
    spr0215 (rpoA)
   03400 DNA repair and recombination proteins [BR:spr03400]
    spr0215 (rpoA)
Enzymes [BR:spr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     spr0215 (rpoA)
Transcription machinery [BR:spr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     spr0215 (rpoA)
DNA repair and recombination proteins [BR:spr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      spr0215 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 RAD51D_N
Other DBs
NCBI-ProteinID: AAK99019
UniProt: P66709
Position
209011..209946
AA seq 311 aa
MIEFEKPNITKIDENKDYGKFVIEPLERGYGTTLGNSLRRVLLASLPGAAVTSINIDGVL
HEFDTVPGVREDVMQIILNIKGIAVKSYVEDEKIIELDVEGPAEVTAGDILTDSDIEIVN
PDHYLFTIGEGSSLKATMTVNSGRGYVPADENKKDNAPVGTLAVDSIYTPVTKVNYQVEP
ARVGSNDGFDKLTLEILTNGTIIPEDALGLSARILTEHLDLFTNLTEIAKSTEVMKEADT
ESDDRILDRTIEELDLSVRSYNCLKRAGINTVHDLTEKSEAEMMKVRNLGRKSLEEVKLK
LIDLGLGLKDK
NT seq 936 nt   +upstreamnt  +downstreamnt
atgatcgagtttgaaaaaccaaatataacaaaaattgatgaaaataaagattatggcaag
tttgtaatcgaaccacttgaacgtggctacggtacaactcttggtaactctcttcgtcgt
gtacttctagcttctctaccaggagcagctgtgacatctatcaacattgatggtgtgtta
catgagtttgacacagttccaggtgttcgtgaagacgtgatgcaaatcattctgaacatt
aaaggaattgcagtgaaatcgtacgttgaagacgaaaaaatcatcgaactggatgttgaa
ggtcctgctgaagtaacagctggtgacattttgacagatagcgatattgaaattgtaaat
ccagatcattatctctttacaatcggtgaaggttcttctctaaaagcgactatgactgtt
aacagtggtcgtggatatgtacctgctgacgaaaataaaaaggataatgcaccagttgga
acacttgctgtagattctatttatacaccagttacaaaagtcaactatcaagtggaacct
gctcgtgtaggtagcaatgatggtttcgacaaattaacccttgaaatcttgacaaatgga
acaattattccagaagatgctttagggctttcagcacgtattttgacagaacatcttgat
ttgtttacaaatcttactgagattgctaagtcaactgaagtgatgaaagaagctgatact
gaatctgacgaccgtattttagatcgtacgattgaggaactggacttgtctgtgcgttca
tacaactgtttaaaacgtgccggtatcaatactgtgcatgatttgacagaaaaatctgaa
gcagagatgatgaaagtacgaaatcttggacgcaagagtttggaagaagtgaaactcaaa
ctcattgatttgggtcttggattaaaagataaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system