KEGG   Streptomyces pristinaespiralis: SPRI_2379
Entry
SPRI_2379         CDS       T04073                                 
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
spri  Streptomyces pristinaespiralis
Pathway
spri03030  DNA replication
spri03410  Base excision repair
spri03420  Nucleotide excision repair
spri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPRI_2379
   03410 Base excision repair
    SPRI_2379
   03420 Nucleotide excision repair
    SPRI_2379
   03430 Mismatch repair
    SPRI_2379
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spri03032]
    SPRI_2379
   03400 DNA repair and recombination proteins [BR:spri03400]
    SPRI_2379
Enzymes [BR:spri01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     SPRI_2379
DNA replication proteins [BR:spri03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SPRI_2379
DNA repair and recombination proteins [BR:spri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     SPRI_2379
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SPRI_2379
   MMR (mismatch excision repair)
    DNA ligase
     SPRI_2379
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SPRI_2379
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 HHH ILEI zf-TFIIB HHH_8
Other DBs
NCBI-ProteinID: ALC20685
UniProt: A0A0M4DE16
Position
complement(2809803..2811986)
AA seq 727 aa
MAGEQQTNLPAQAREEHALLAEQIEEHRFRYYVKDSPVISDAEFDKLLRELEGLEERYPE
LRTPDSPTQKVAGDYETELTKVEHRERMLSLDNAFDDAELAAWAERVARDVGAPGYHFLC
ELKVDGLAVNLTYEKGRLTRAATRGDGRVGEDITPNARTIAGIPDRLGGDRIPRLVEIRG
EVYFPMEQFQELNARRVAAGEQPYANPRNSASGSLRQKDPKVTATLPLRMVVHGIGAREG
LTIDRLSQAYDLLREWGLPTARHNKVVGSLEEVREFIAYFGEHRHSVEHEIDGVVVKLDE
IPLQGRLGSTARAPRWAIAWKYAPEEVNTKLVNIRVGVGRTGRVTPYAQVEPVTVAGSEV
EFATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGSEREFVMPAECPECGT
ALRPMKEGDVDLRCPNARSCPAQLRERLFYLAGRKALDIEHFGYVAAAALTQPLEPAEPP
LVDEGDLFDLTMEQLLPIKAYVLDQDSGLPKRDPKTGEDKIATVFANQKGEPRRNAVAML
ENIAAAKERPLARIITGLSIRHVGPVAAEALAREFRSIDRIEQATEEELAAVDGVGPTIA
AALKQWFEEDWHREILRKWRAAGVRTEEHGSGEDAGPRPLEGLTVVVTGTLENHTRDGAK
EALQSLGAKVAGSVSKKTSFVVVGDNPGSKYDKAVQLKVPVLDESGFAVLLEEGPEAARE
AAVTEEA
NT seq 2184 nt   +upstreamnt  +downstreamnt
gtggccggcgaacagcagacgaacctgcccgcccaggcccgggaggagcacgcgctcctg
gccgagcagatcgaggagcaccgcttccggtactacgtgaaggacagccccgtcatcagc
gacgcggagttcgacaagctcctccgggagctcgaagggctcgaggagcggtacccggag
ctgcgcacgcccgactcgccgacccagaaggtcgccggggactacgagaccgagctgacc
aaggtcgagcaccgcgagcggatgctctccctggacaacgccttcgacgacgcggagctc
gccgcctgggccgagcgcgtcgcccgcgacgtcggcgcccccggctaccacttcctgtgc
gagctgaaggtcgacggcctcgcggtcaacctgacctacgagaagggccggctgacccgc
gcggcgacccgcggcgacgggcgcgtgggcgaggacatcactccgaacgcccgcaccatc
gccggtatcccggaccggctggggggcgaccgtattccccgcctcgtggagatccgcggc
gaggtctacttccccatggagcagttccaggagctcaacgcccgccgtgtggccgccggc
gagcagccctacgccaacccgcgcaactccgcctccggttcgctgcgccagaaggacccc
aaggtcaccgccacgctgccgctgcgcatggtggtgcacggcatcggcgctcgcgagggc
ctgacgatcgaccggctctcccaggcgtacgacctgctccgcgagtggggtctgcccacc
gcccggcacaacaaggtggtcggctcgctggaggaggtgcgggagttcatcgcctacttc
ggtgagcaccgccactccgtggagcacgagatcgacggggtcgtggtcaagctcgacgag
atcccgctgcagggccgtctcgggtcgaccgcgcgtgcgccgcgctgggcgatcgcctgg
aagtacgcgccggaggaggtcaacaccaagctggtcaacatccgcgtcggtgtcggccgc
accggccgtgtcaccccgtacgcccaggtcgagccggtcacggtggcgggctccgaggtc
gagttcgcgaccctgcacaaccaggacgtggtcaaggccaagggcgtcctcatcggtgac
acggtggtgctgcgcaaggccggtgacgtcatccccgagatcctcggcccggtggtggac
ctgcgggacggcagcgagcgggagttcgtgatgccggccgagtgccccgagtgcggcacc
gcgctgcggcccatgaaggagggcgacgtcgacctgcggtgccccaacgcccgctcgtgc
cccgcccagttgcgggagcgactcttctacctggcggggcgcaaggcactcgacatcgag
catttcggttacgtcgcggccgcggctctcacccagccgctcgagcccgcggagccgccg
ctcgtcgacgagggcgacctgttcgacctcaccatggagcagctgctgcccatcaaggcg
tacgtcctcgaccaggacagcggcctccccaagcgcgacccgaagaccggcgaggacaag
atcgcgacggtgttcgccaaccagaagggcgagccgcgcaggaacgccgtggcgatgctg
gagaacatcgcggcggccaaggagcgcccgctggcccgcatcatcacgggactgtcgatc
cgtcatgtgggcccggtcgccgccgaggcgctcgcccgtgagttccgctccatcgaccgt
atcgagcaggcgacggaggaggagctcgcggcggtcgacggtgtgggccccaccatcgcc
gccgcgctcaagcagtggttcgaggaggactggcaccgcgagatcctgcgcaagtggcgt
gcggcgggcgtgcggacggaggagcacggctcgggggaggacgcggggccgcgtccgctc
gaagggctgacggtcgtcgtcaccggaacgctggagaaccacaccagggatggcgcaaaa
gaagcgctccagagcctcggagcgaaagtggccggttccgtatcgaagaagacgagcttc
gtggtggtcggtgacaatcccggttccaagtacgacaaggcagtgcagttgaaggtgccg
gttctggacgagtcgggcttcgcggtcctcctcgaagagggaccggaggcggctcgtgag
gctgctgtgaccgaggaggcgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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