KEGG T05967: E2P86

Sphingobacterium psychroaquaticum: E2P86_10100

Entry

E2P86_10100       CDS       T05967

Name

(GenBank) RluA family pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

spsc Sphingobacterium psychroaquaticum

Brite

KEGG Orthology (KO) [BR:spsc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spsc03009]
    E2P86_10100
   03016 Transfer RNA biogenesis [BR:spsc03016]
    E2P86_10100
Enzymes [BR:spsc01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     E2P86_10100
    5.4.99.29  23S rRNA pseudouridine746 synthase
     E2P86_10100
Ribosome biogenesis [BR:spsc03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    E2P86_10100
Transfer RNA biogenesis [BR:spsc03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    E2P86_10100

SSDB

Motif

Pfam:

PseudoU_synth_2 SKA2 LRS4 DUF1192 DUF603 DUF4407 DUF4618

Other DBs

NCBI-ProteinID:

QBQ43054

UniProt:

A0A7Z1X394

Position

complement(2388129..2389814)

AA seq 561 aa
MGAGLPTFFHSFQADISEIGKAERFNFPFFYEPDALSRLAAAELQTYLEQQKDFVHNFGL
TPMEGTPIGKMFGVLVVATSDGTLGYLAACSGKLAGRNTHTHFVPPVFDMLTKDSFFLQE
EETINALNFQIATLESAAVLPNSKVELEQLTIESELALKRSREAMKVAKANRKQTREQVL
GTISDEAYALLIEDLIKQSYRDQHEHAVLKETWKSRLHALQAKIENLQAEIDALKQQRKD
KSAKLQARLFDEYQFLNGYGTNKSLLQIFKEAGNIIPPAGAGECAAPKLLQYAFAHQLQP
ISIAEFWWGSSPASAVRTHKSFYPACKSKCEPILTHMLAGIDVDPNPLLDNPALDKELPI
IYEDEAIIVVNKPNEFLSVPGIHIQDSVYTRILARNPTIEGPVIIHRLDMSTSGILVLAK
TKFAHHYIQQQFIKHTIEKRYTALLDGVVTNPMGEIKLPLRVDLDDRPRQLVCYEYGKEA
HTSYRVVGIEQHKTRIHFFPHTGRTHQLRVHAAHSLGLNCPILGDDLYGKRADRLHLHAG
YIKFLHPLTNQEVTFNVPDPF

NT seq 1686 nt +upstreamnt +downstreamnt
atgggggcaggattaccgactttttttcattcttttcaggccgatatttcagaaattggg
aaggcagaacgctttaatttccctttcttttatgagcccgatgcattaagtcgattggcg
gccgcggaactccagacatacctcgagcaacagaaagattttgtacataatttcgggctt
acaccgatggagggcacaccgatcggcaaaatgttcggtgtcctggtcgtcgcgaccagt
gatggaacattaggttatctagcagcctgctctggtaaactggctggtcgaaatacacat
actcattttgtcccccccgtattcgatatgctaacaaaagatagtttctttctgcaggaa
gaagaaactattaatgccttgaattttcaaatagcaacgttggaatcagcggcagtatta
cctaacagtaaggttgaattggagcagttgactatagaaagtgagctggcattaaagcgt
agccgtgaggcgatgaaggtcgcgaaggcaaaccgcaaacagacgcgggaacaagtttta
ggaacaataagcgacgaagcttatgcactgcttatcgaagacctcattaaacaaagttat
agagatcaacatgagcatgccgttttaaaggaaacctggaagagtaggcttcatgcgtta
caggcaaaaatagaaaacttgcaagcggagatcgatgcattaaaacagcaacgcaaagac
aaatcggctaagttacaagcacgtttgtttgatgaataccaattcttaaatggatatgga
acgaacaaaagtttattgcagatctttaaagaggcgggaaatatcattcctccggccggt
gcaggagaatgcgctgcgcctaagcttttgcagtatgcttttgcccaccaacttcaacct
atttcgattgctgaattttggtggggaagttcaccggcgtcggccgttcgaacacacaag
agcttctaccctgcctgtaaaagtaaatgtgagccaattttgacacatatgttagcgggc
atcgatgtggatccgaatcctttattggataaccctgcattagacaaggaacttccgatt
atctatgaagatgaagccatcatcgtggtgaacaaacccaatgaattcctgtcggttcca
ggaatacatattcaagattctgtttacacgcggattcttgctcgaaatcccaccattgaa
ggacccgttatcatacatcgtctagatatgtcaacatcaggtatcttggtcttagcaaaa
acgaagtttgcgcatcattatatccagcagcagtttataaaacatacgatcgaaaaaagg
tacacggctttattggatggtgtcgtgacaaacccaatgggggaaatcaaacttcctctt
cgtgtggatctcgatgaccgcccgcgccagttggtgtgctatgagtatggtaaagaggca
cataccagctatcgtgtagttggcatagagcaacacaagacacggattcatttttttccg
catacaggccgtacacatcagctcagagtacacgcagcacatagcttaggtcttaattgc
ccaattttaggtgatgatttgtatggaaagcgagctgatagactacatttacacgcgggt
tatataaagtttttacatccactcacgaaccaagaagtcacgtttaacgttcctgaccca
ttttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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