KEGG   Shewanella psychrophila: Sps_00037
Entry
Sps_00037         CDS       T05063                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
spsw  Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:spsw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spsw03032]
    Sps_00037
   03400 DNA repair and recombination proteins [BR:spsw03400]
    Sps_00037
Enzymes [BR:spsw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Sps_00037
DNA replication proteins [BR:spsw03032]
 Prokaryotic type
  DNA Topoisomerases
   Sps_00037
DNA repair and recombination proteins [BR:spsw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Sps_00037
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: AQS35262
UniProt: A0A1S6HIC2
Position
40596..43013
AA seq 805 aa
MSENSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCNEV
VITIHADGSVSVKDDGRGIPVEIHPEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSEKLQLTIRRNGKLYEQFYSMGEPDAPIKEIGDSTSTGTELRFWPSHETFSDT
LFHFDILVKRVRELSFLNSGVGIRLVDERDNRDEFFQYQGGISAFVDYLNVNKTPVNKDV
FHFIQEREDGITVEVAMQWNDGFQENIFCFTNNIPQRDGGTHLAGFRGALTRNLNAYMER
EGYNKKGKTSATGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQTMGEQLGD
YLMEHPNEAKLIVGKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEKDPALSE
IYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYDPDKTRYHNIVIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKK
GRQEQYLKDELALTEFLTNLALDGGELHASADAPAMSGAPLEKLVYQYREVETIFERLEQ
RYPTLLTERMLYHPALSTDVLADEGKVQKWCDEFVADLTEKESGGVIYSAEPILDPERKV
YLPNVHIRKHGIDTSYLFTYDFLTSSDYERMAKLAAALEGLIVDGGYVKRGERVKEVSTF
VEALNWLMNDSRRGLYIQRYKGLGEMNPEQLWETTMDPESRRMLVVTIEDAIGADQLFTC
LMGDQVEPRRNFIEENALNVANLDV
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtcagagaatagttacgattcttcgagtattaaggtactaaaaggccttgatgcagta
cggaagagaccagggatgtatatcggtgataccgacgacggttcaggtctacatcacatg
gtattcgaagtggtcgataactctatcgatgaagctttagcgggtcattgtaatgaggtt
gtcatcacaatccatgccgatggttcggtatcggtgaaagatgatggtcgtggtattcct
gtggaaattcacccagaagagggtatttcggccgcagaagtgatcatgaccgtactccat
gcgggcggtaagttcgatgataactcatacaaagtctccggtggtcttcatggcgtgggg
gtttcggttgtaaacgctctgtctgagaagctacagcttactattcgtcgtaacggtaag
ctctatgagcagttctacagcatgggtgagcccgatgcaccgatcaaagagattggcgat
tcgactagtacgggtaccgagctaagattctggccaagccatgagaccttttccgatact
ctgttccatttcgatattctggttaaacgggtacgtgagctgtcattcctaaactcaggt
gtaggcattcgcttggttgatgagcgtgataaccgtgatgagtttttccagtaccaaggt
ggcataagcgccttcgtcgattacctgaacgtgaataagacacctgtgaataaagacgtg
tttcactttattcaagagcgtgaagacggcatcacagtcgaagtggctatgcagtggaac
gatggtttccaggagaatatcttctgtttcaccaataacattcctcagcgtgatggtggt
actcaccttgctggcttccgtggtgccttgacccgtaaccttaatgcctacatggagcgt
gaaggttataacaagaagggcaagactagtgctactggtgatgatgcccgtgaaggcctg
actgcggttgtttcggttaaggttccggatcctaagttcagctctcagactaaagacaag
ttagtttcaagtgaagttaagtcggcggttgagcagaccatgggtgagcagttgggtgat
tacctgatggagcatccaaacgaagccaagttgatagtaggtaagattatcgatgcggct
cgtgctcgtgaagcggcacgtaaagcccgtgagatgacgcgtcgtaaaggcgcattagat
ttaggtggtctgccgggtaaactagctgattgccaagagaaagaccccgcgctttctgaa
atatacatagtggaaggagactctgctggcggtagcgccaagcagggacgtaaccgaaag
aatcaagctattctgccattgaaaggtaagatcttaaacgttgagaaggctcgcttcgat
aagatgctttcttctcaggaagttgcgactctgatcaccgcactaggttgtggtattggt
cgtgatgaatacgatcccgataagacgcgttaccacaacatcgtcatcatgaccgatgcc
gacgtcgatgggtctcacattcgaactctgctgctgaccttcttcttccgtcagatgcct
gagcttatcgaacgtggctatatttatatcgcccaaccacctctctataaggtgaagaaa
ggcagacaggaacagtacctgaaagatgaacttgccttgactgagtttctgactaacttg
gccttagacggtggtgaactccacgcctctgctgatgcgccggctatgtcgggtgcaccg
ttagagaaattggtttatcagtatcgtgaagttgaaaccatctttgaacgtttagagcag
cgttatccgactctactgaccgagcgtatgctctatcatccggcactgagtacagatgtg
ttagccgacgagggtaaagttcagaaatggtgtgacgagtttgtcgcagatctaacagag
aaagagtctggcggtgttatctatagcgctgagccgattttggatcctgagcgtaaagtg
tatctgccaaatgtgcacatacgtaagcatggtatcgataccagctatctgtttacttac
gacttcttgacctcaagtgactatgagcgcatggctaagcttgctgcggcgcttgaagga
cttatcgttgatggcggttatgttaagcgtggtgagcgcgtcaaggaggtttctaccttc
gtcgaggcacttaactggctgatgaatgattctagacgtggtctctatatccaacgttat
aagggattgggcgagatgaaccctgagcaactttgggaaaccactatggatcctgagtcg
cgccgtatgctggtagtgactattgaagatgccatcggtgccgatcagttgtttacctgt
ttgatgggtgatcaagttgaaccgcgtcgtaacttcatcgaagagaatgcgttgaacgta
gcgaacttggatgtctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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