KEGG   Strongylocentrotus purpuratus (purple sea urchin): 115918684
Entry
115918684         CDS       T01019                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    115918684
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spu03021]
    115918684
   03019 Messenger RNA biogenesis [BR:spu03019]
    115918684
Enzymes [BR:spu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     115918684
Transcription machinery [BR:spu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     115918684
Messenger RNA biogenesis [BR:spu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     115918684
SSDB
Motif
Pfam: Ssu72 LMWPc
Other DBs
NCBI-GeneID: 115918684
NCBI-ProteinID: XP_030842815
Position
Unknown
AA seq 191 aa
MPLRIAVVCSSNQNRSMEAHAILSKKGFNVKSYGTGATVKLPGPAQDKPNIYDFKTTYEE
MYQDLKRKDRDLYTQNGILHMLDRNRRIKSKPERFQNSKDKFDVVLTAEERVYDQVLEDF
ESKEEETQIPVHIINIDIQDNHEEATIGAFRMSNLCIKLEALRDLDKEIDELIQLFEEEL
NISVLHTLCFY
NT seq 576 nt   +upstreamnt  +downstreamnt
atgcctcttagaattgcagttgtgtgctcaagtaatcagaacaggagtatggaagcccat
gccatactaagcaaaaaaggtttcaatgtgaagtcctatggaactggtgcgacggtaaag
ctgcctggcccagcacaagacaagcccaacatttatgacttcaagaccacctatgaagag
atgtatcaggacctgaaacgcaaggaccgtgatctatatacacagaatggtattctacat
atgctagacaggaacagaagaataaagtcaaagccggagagatttcagaattccaaggat
aaatttgatgtcgttctcactgcagaggagagagtctacgatcaagttttggaggatttt
gagagcaaggaggaagaaacccagattccagttcatatcatcaacattgacattcaagat
aaccatgaagaggcaacaataggtgcatttaggatgagcaacttgtgcataaagcttgag
gcgcttcgagatcttgacaaggaaatcgatgaattaatccaattgtttgaagaggagctt
aacatcagtgtgcttcataccttgtgtttctactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system