KEGG   Strongylocentrotus purpuratus (purple sea urchin): 373533
Entry
373533            CDS       T01019                                 
Symbol
NFkB
Name
(RefSeq) NFkB protein
  KO
K02580  nuclear factor NF-kappa-B p105 subunit
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:spu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:spu03000]
    373533 (NFkB)
Transcription factors [BR:spu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    373533 (NFkB)
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer Ank_2 Ank Ank_3 Ank_4 Ank_5 TFIIA
Other DBs
NCBI-GeneID: 373533
NCBI-ProteinID: NP_999819
UniProt: O96458
AA seq 1125 aa
MEEKSDSVQSVEIPEDMLQQLIHQNGQVGLPMSGAENDFDSNDLMHLPVMKGLQEEVSKP
HLKILEQPRQRGFRFRYGCEGPSHGGLPGQNSQRGKRSFPSVEICNYKGSARIVVSLVTN
EETPRPHAHSLVGKHCKDGLCTVQVGPKDMTASFPNLGILHVTRKDVVPTLKTRILAQHR
LYKDLINNSTPGESHWTEPSDAEIEKKAKEMAKDMDLSVVRLCFQTYLPDISGHFTRPLD
PVISVPVFDSKAPNATTLKICRMDKSAGCCTGGEEVYLLCDKVQKEDIQVKFFEISADGQ
MVWQSLAEFGPTDVHRQYAIVFKTPAYKDINIDKPVYVHVQLKRKSDNETSDPKPFTFHP
QVPDREGILRKRKKHLAHFNEYSSTYQQGGLGGSNGMGGGGGSTSFNFNNPNMGYGANTY
NFSGNQMTSSTSQPQSVPQQIPSHQSGVVATGNSSQQMVYTTSTGAQNHQPLPSIATLAR
KPQEQLQQQQFQLQQQLQQQQQQQQQQQQQQQRQQQQQQPMQMDFQMPPIQGSAMGGQAG
GDRVKMESESKYCGNMDTAEGFQLDSNTLRDCGPLPDLKELQDTGVLDLIPKGISRPKDM
VEKNIQTDDITIDSDSMAWHVAQVTANALHDYAATGDIKTILTVQRHLIAVEDDNGDTAL
HAAIINKKYDVTHALLSAVIKIPDQIIVNQTNHLKQTPLHLAVITNQSKMVEVLLRCGAN
PNLCDHEGNTPLHLATMMGMTEGVNFLVRGPKAKAAIKPIKTDINPTNYEGLAPVHLAVI
AKNLDILKALVSSGADVNVADGKTGRTALHYAVEVESFPILGYLLIEAKVDINAVTFCGD
SALHLASSLDLRAVATLLIAAGADPKLENADLGDDSDSDVDGEDDDGEKDGEKKEEGVEE
EEKEKHGKTPYQLATSAKMKEVLSGHSTRRVEEEDFDYIETGSAISSVGSIQSEDHMKVN
SWDQGYFSGKSSSSVSNLELKRTWPRVKSRMLGSSLVTSKGDIGLLSETTTEKLGSMLDD
NYPTTQSWFTLANRLGLSNMLNFLKLVPSPTAVILKQFEAMDGTIKELRDVLSSMNHIEA
VALLDQAVSWRKEKADEAHMYSSMHQSLGKMNLSDAHMHQHQFVY
NT seq 3378 nt   +upstreamnt  +downstreamnt
atggaggagaaatctgactcggtgcagtctgtggagattccagaggacatgttacagcag
ctcatacaccagaacggtcaagtgggcttacccatgtctggagctgagaatgatttcgat
agcaacgacctgatgcatctacctgtaatgaaaggtcttcaggaagaggtgtccaaacct
catctcaagatattggaacaacccagacagcgaggatttcggtttcgatatggatgtgag
ggtccatcacacggaggattaccaggccagaacagtcagagaggcaaaagatccttccct
tccgttgagatctgtaattacaaaggctccgcccgtatagttgtctccttggtaaccaat
gaagagacgccccgcccccacgcccactctctggtagggaagcactgtaaggatgggctc
tgcacagtccaggttggccccaaggacatgacagcaagcttcccaaacctgggcatcctg
cacgtgacgcgcaaggacgtcgtgccgaccctcaagacccgtatcttggcccagcatcgt
ctctacaaggacctgatcaacaactctacaccaggggagagccactggacggagccgtcc
gacgcagagatcgagaagaaagccaaggagatggccaaggatatggatcttagcgttgtc
aggctctgtttccagacctatctgccggacatctcaggacacttcacccgaccccttgac
cctgtcatatcagtgccagtctttgatagcaaggcacccaacgccacgaccctcaagatc
tgtcgcatggataagagtgcaggatgctgtacaggaggagaggaggtctatctgctctgt
gataaggtccagaaggaggacatacaggtcaagttctttgagatctctgccgatggtcag
atggtctggcagagcttagcagagtttggtccaaccgatgttcatagacagtatgcaatt
gtatttaagactccagcctacaaagatataaacattgataaacctgtgtatgtgcacgtt
cagctcaagaggaaatcagataatgagaccagtgatcccaagccttttaccttccaccct
caagtaccagatcgggaaggaatccttcgtaagcgtaagaagcacttggctcactttaat
gagtatagtagcacctaccagcagggtggcctagggggaagcaatggcatgggaggagga
ggaggatcaacatcttttaatttcaacaaccctaacatggggtatggagctaatacctac
aactttagcggcaaccagatgacctcttcaacatcgcagccacaatcagtgccgcaacaa
atccctagccaccagtctggggtcgttgctaccggcaactcctctcagcagatggtatac
acaacatcgaccggtgcacagaaccaccagcccttgcctagcattgcaacactagcaagg
aaaccccaagagcagttacagcaacaacaattccagttgcagcaacaactgcagcagcaa
cagcagcaacaacagcagcaacagcagcaacagcaacgacagcagcaacagcagcagccg
atgcagatggatttccagatgccacctatccaaggcagcgcgatgggaggccaggctggt
ggagatcgcgttaagatggagagtgagagcaaatactgtggcaacatggatacagcagaa
ggatttcagctggactccaatacattacgtgattgtgggccactaccagacctcaaagaa
cttcaagatacaggtgtcttggatctcatcccaaagggtatctcaagacccaaggatatg
gtggagaaaaatattcaaactgatgacataacaatagacagtgattccatggcgtggcat
gttgcccaggtaacagccaacgctcttcatgactacgcagctacgggtgacattaaaaca
atcctaacggtccagagacatcttatcgctgtggaagatgataacggagatacagcgctg
catgctgcaatcatcaacaagaagtatgatgtgacacatgcgcttctctcggctgtaatc
aagattccagatcagatcatcgttaaccagactaaccatttgaaacagactcccctccac
ctggccgtcatcacaaatcaatccaagatggtggaggtccttttgagatgcggggccaac
cccaacctctgtgatcatgagggtaatacccccctccatctggccactatgatgggtatg
acagaaggtgtaaacttcctggtgcgtggccccaaggctaaggcagccattaaacccatc
aagaccgacattaatccaacaaactatgaaggccttgccccagtccacctggctgtgatc
gctaagaacttggatatccttaaggcacttgtgtcgtcaggagcggatgtcaatgtagct
gatgggaagaccggccgaaccgccctccactatgccgtggaagtcgagagcttcccaatt
ctgggctacctcctgatcgaagccaaggtcgacatcaatgccgtgaccttctgtggggac
tcggcccttcacctggccagtagcctggatctgagggcggtggccacgctcctcatcgca
gcaggagctgaccctaagctggagaacgccgacctgggggacgacagtgacagcgatgtc
gacggggaggatgacgatggtgagaaggatggggagaagaaggaggagggagtggaagag
gaggagaaggagaagcatgggaagacaccttatcagctggccacaagtgctaagatgaaa
gaagtcttgtctggacattccaccaggagagtagaggaggaagattttgactacatcgag
accggaagcgccatcagttccgttgggtcaatccaatcagaggaccacatgaaagtcaat
agctgggaccagggctacttctcagggaagtccagctcctctgtctctaacctggaactg
aagcgaacctggcccagagttaaaagccgaatgctagggagctccctcgtcacatctaaa
ggagacattggcctgttgtctgaaaccaccaccgagaagctaggctctatgttggatgat
aattaccctactacacagagctggtttaccctggccaatcggctcggactctccaacatg
ctcaactttctcaagcttgtcccaagccccactgcagtcattctcaaacagtttgaggct
atggatggaaccatcaaggagctccgagacgtcctctcatcaatgaatcacatagaagct
gtggccttactggatcaggctgtctcatggaggaaagagaaagctgatgaggctcatatg
tacagttcgatgcaccagtctttgggtaagatgaatttgtccgacgctcacatgcatcaa
catcaattcgtttactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (8)   
   Pfam (8)   
All databases (65)   

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