KEGG   Strongylocentrotus purpuratus (purple sea urchin): 576753
Entry
576753            CDS       T01019                                 
Name
(RefSeq) DNA topoisomerase 3-alpha
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03440  Homologous recombination
spu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    576753
   03460 Fanconi anemia pathway
    576753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spu03032]
    576753
   03400 DNA repair and recombination proteins [BR:spu03400]
    576753
Enzymes [BR:spu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     576753
DNA replication proteins [BR:spu03032]
 Eukaryotic type
  DNA Topoisomerases
   576753
DNA repair and recombination proteins [BR:spu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     576753
   FA (Fanconi anemia) pathway
     576753
SSDB
Motif
Pfam: Topoisom_bac zf-GRF Toprim zf-C4_Topoisom Lar_restr_allev Rng_hyd_C
Other DBs
NCBI-GeneID: 576753
NCBI-ProteinID: XP_030841045
Position
Unknown
AA seq 1140 aa
MLIWKSCLRISLCTYINMARGHATKVLNVAEKNDAAKSIADVMSHGRYRRREGFSKFNKI
YEFDYSMLNQQCDMTMTSVSGHLLNYEFALAYQKWHSCNPVALFDAPVQKGCPENYKDIK
RTLEREARAADVLVIWTDCDREGENIGYEVIDVCKAVKPRLDVYRARFSEITPQSITRAC
ANLVRPDQRVSQAVDVRQQLDLRIGAAFTRFQTLRLQRVFPDLLQNQLISFGSCQFPTLG
FVVERYKQVEAFIPETFYKIKVTHKTEDGLVEFHWKRHRLFDQLACQVFYEICTENPLAT
VVDERSKPKSKWRPLPLDTVELEKLAARKLKISAQQAMKIAEKLYTQGFISYPRTETNIF
PKELNLVPLIEKQTQDAQWGAFAGNLLQQGPHPRQGKKTDHAHPPIHPTKYNGNLQGNEQ
KVYELIVRHFLACCSQDAQGKETIVNITIAEEEFTATGLMIIARNYLDVYPYEKWNAKII
PVYDRGQTFEPTSLEMVDGQTQAPPLLTEADLITLMDKHGIGTDATHAEHIETIKSRLYV
GVRPDGRFVPGELGMGLCEGYDNMGYELSKPNLRAELESDLKRISDGQKNPEDVLAEQVD
KYKQVFIEAARKATMLDSALEQYLGQPAQSHNATSLQVSAPSIVRKCPHCSEPMTLKERK
AGGWMVSCMGYPGCKAAVWFPAVIESADVSDTVCQQCQPGPVNKIKFKFKRGSVPPMIPL
EYEGCIGGCDTTLKDVLDLNLAYLRPRDQSYQASGNRTANRGGGGGGGRGGGGGGGRGGG
GGGGGRGGGGGAGGGFSNSTRGGGGGRPVGGSSVDIDDNEASHWFNSSSAPSSALSSSSS
TRNGQFGGNRGGGGRGGGRGGGGGDGGWNDNSSSRSYSTSSFGNSAARTPLSQIPSRNGS
KSSSSTSNAVVCSCGQDAVQLTVRKEGPNQGRQFFKCQSGGCNFFLWSEENTENTSTPDL
GNTGRNNTSPSFSGGFDTPATGLNGMADRSSGYGTDGGDQGSSTNVWGEVMCQCNAAAVQ
RTVQKEGPNQGRQFYVCGKPREKQCSYFQWADEEPKSGGGGGGGGGFKGSSNFSRGGGSA
GGQAKNWSSSSFQGGRGGRGRGGGGGGRGGGGGGGQGKRRKPTCSICHEEGHTKRSCPQK
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgttgatttggaagtcttgcttgaggatctctttgtgcacctacatcaacatggcacga
ggacatgcaaccaaggttctgaatgtagcagagaagaatgatgctgccaagtcaatagca
gatgtcatgtctcacggtagatacaggaggagagaaggcttctcaaagttcaataagatt
tatgagtttgactacagcatgttgaatcagcaatgtgatatgaccatgacgtcagtctcc
gggcatctcttgaactatgaatttgctttggcctatcagaaatggcattcatgcaatcct
gtggccctctttgatgctcctgtgcagaaaggatgcccagagaactacaaagatattaag
agaacgttagagagagaagcaagagcggctgatgtcctcgtcatatggactgattgtgat
agggaaggggagaatattggctatgaggtcattgatgtttgcaaagcagtgaaacctaga
ctggatgtatacagagcccggttctccgagattactccgcaatccatcacccgtgcgtgt
gcgaatcttgtcagacctgaccagcgtgtttcccaagcagtggacgttaggcagcagctt
gacctaaggataggtgctgctttcacccgattccagaccctacgcctccagagagtcttc
cctgatcttctgcagaaccagctcatcagcttcggctcttgtcagttccctaccctgggt
ttcgtagtggaacgctacaagcaggttgaagccttcattccggaaacattctataagatc
aaagtaacacataagactgaagatggcctggttgagttccactggaagaggcataggtta
tttgatcaactggcctgtcaagtcttctacgaaatctgtactgagaaccctcttgcaact
gttgttgatgagcgcagtaaacccaagagtaaatggagaccactgccactggatactgtg
gaactagagaagcttgctgcccgtaagctgaagatcagtgcccagcaggccatgaagata
gcagaaaaactttatactcagggattcatcagctatcctcgtacagagaccaacattttc
ccaaaggagctcaatttagttccattgattgagaagcagactcaggacgcccagtgggga
gcatttgccggtaatcttctgcagcaaggcccccatccaaggcagggtaagaagactgac
cacgcccatcctccgatccaccctaccaaatacaacggtaacctacagggtaatgagcag
aaggtctatgagcttattgtcagacacttcttagcttgctgctctcaggatgcccaagga
aaggagaccattgttaacatcaccatcgccgaggaggagttcactgctacgggactgatg
atcatagctaggaactacctggatgtctacccgtatgagaaatggaatgctaaaatcatc
cccgtttatgacagaggtcagacttttgaacccacttcgctggagatggtagatggtcag
acacaagcccctcccctactgactgaagctgatctcatcaccctcatggataagcatggc
atcgggaccgatgctacacacgcagagcacatcgagaccatcaagtctcggctgtacgtg
ggagtgcgtccagacggccggtttgtgcccggtgagctcggcatggggctgtgtgagggc
tatgataacatgggctacgagctgtctaaaccaaacctcagagcagaactcgaatcagat
cttaaaagaatatctgatggtcagaagaaccctgaggatgttcttgctgaacaggtggat
aaatacaagcaggttttcatagaggctgcaagaaaggcaaccatgttagacagtgcattg
gaacagtatttgggtcagcctgctcaatcgcacaatgcaacctcattacaggtgagtgcg
ccctctattgtccggaagtgtcctcactgcagcgagccgatgaccctgaaggagaggaaa
gctgggggatggatggttagctgtatggggtacccgggatgcaaggcagcggtctggttc
ccggccgtcatagagtctgctgatgtgtctgataccgtctgtcagcagtgtcaacctgga
ccagtcaataagatcaaattcaagttcaagagaggatctgtacccccaatgataccactt
gaatatgaaggatgcataggaggatgtgacacaactcttaaagatgtgctggatctcaat
ctagcttacctcagaccaagagatcagtcttaccaagcttctggtaacagaactgcaaac
agaggaggaggaggaggaggaggaagaggtggtggtgggggaggcggaagagggggtggt
gggggaggaggaggaagagggggaggaggaggtgctggaggaggattttccaacagcacc
agaggaggaggtggaggtagacctgtagggggaagctctgtggacatagatgataatgaa
gcatcacattggttcaactctagcagtgccccatcgtcagcattgtcatcttcatcatct
accagaaatggacagtttggaggtaataggggaggaggaggaagaggaggaggaagagga
ggaggaggaggagatggaggatggaatgataattcttcatcaagatcatactccacgtca
tcctttggaaattctgccgcaaggactcccctttctcaaattccatcaaggaatgggagt
aaaagtagtagtagtacaagcaatgcagtggtatgtagctgtggtcaggatgctgttcag
ctcactgtgagaaaagagggcccaaatcaaggtcgccaatttttcaaatgccagtcaggg
ggctgcaacttcttcctctggtctgaagaaaacacagagaatacctcaaccccagatctt
ggcaacaccggtcgaaacaacacaagtccctcattcagtggtggttttgacacccctgcc
actggcctgaatggaatggccgatagatccagtgggtatggaactgatggaggggaccag
ggttcttccactaatgtctggggggaggtcatgtgccagtgcaatgcagctgcagtacaa
cgtactgtacagaaggagggtccaaaccaaggtcgtcagttctacgtgtgtggcaaacca
agagagaagcagtgttcatacttccagtgggctgatgaagaacccaagagtggtggtggt
ggtggtggtggtggaggtttcaagggaagctctaacttcagccgaggaggaggaagtgca
ggaggccaggccaagaattggtcctcttcttcattccaaggtggtcgaggtggaagagga
agaggaggaggaggtggaggcaggggtggtggaggtggtggtgggcagggcaagaggaga
aagccaacatgcagtatctgccatgaagaaggccacaccaagagatcctgcccacagaaa
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (73)   
   KEGG ORTHOLOGY (1)   
   RefGene (69)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (6)   
   Pfam (6)   
All databases (97)   

Download RDF
DBGET integrated database retrieval system