KEGG   Strongylocentrotus purpuratus (purple sea urchin): 579417
Entry
579417            CDS       T01019                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
  KO
K20101  ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:spu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spu03019]
    579417
Enzymes [BR:spu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     579417
Messenger RNA biogenesis [BR:spu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     579417
SSDB
Motif
Pfam: Helicase_C OB_NTP_bind HA2_C DEAD HA2_N AAA_22 nSTAND3 AAA_19
Other DBs
NCBI-GeneID: 579417
NCBI-ProteinID: XP_030841646
Position
Unknown
AA seq 1234 aa
MPRDRSDEDRYRRSSDHSRRHHERRDERKSHHESHRERSSYSERSQREDYERHDSSSRRR
DSNHRHRYDESSSRYDDTKHEYRKEREDGTRNKIKSSSRSSPERHRERRPSRFSDLHVRK
PSWNFYGYTSDDIKDAEKLQKERDTSTSNSGGTVISTGLRASSAFTGSSSNQNLEHQDRT
QEEMKRTDKQRSEEQGKPETETSSVAWSFDWDRHRYELDKLFFDDDGVLKRGSSDYGDFW
SFFERYQSFQSKKQARLGSHKAKKTEEDKHAKTGKLKLPRTFDKRHSINLEMTVPSKHTL
KSYSHVTASGEEKDELTSERVLEFKKVLLLYLGFNQKQQFNKVVKLRKDQCNLPIAKYRE
TIVEAVRKNSVVIVAGDTGCGKSTQVPQYLMSAGFDSVAVTQPRRIACISLAKRVGYETL
HEYGSQVGYQIRFETTKTQATKLLFLTEGLLLRQLQLDPVLSQYSVLILDEVHERHLHGD
FLLGVLRCMMEQRDDLKLVLMSATININLFSNYFKDAPVIQVPGRLYPIQVEYVPIKESE
QGSKSERLDARPYLRIMQRIDHKYPDSERGDLLVFLSGVSEISSVVEAAKMYASQTNRWI
VLPLHSSLSVAEQDKAFDISPEGVRKCIVSTNIAETSVTIDGVRFIVDSGKVKEMNYNSQ
AKMQQLQEFWISRASSEQRKGRAGRTGPGVCFRLYGEDDYDAFQAYSTPEIQRVPLDSLL
LQMVALGLKRPREFPFIEAPPANSIENSITFLKEQGALSEKEKLTPVGRMLSQLPVDVVI
GKMLIMGTIFKMIDPVLSIAAALSVQSPFTSRAHRDHDAMSARKSLESDHGDPFTLLNAY
DEWIQMKASGGSSSRKWCKRRGLEEQRFYEMSKLKKQFKELLDTNNLLGMKDARREYSSL
ERQSRNRERKRLRELKRKTQNSSKKRKLLKLENEDFDDSDEDEESDDDASKLQDIQFKLS
HDVTEMEAKSNMNRSLLNREINLLKVILCSGLYPQLAIADDCNSYRKESDQVFHTKAKPF
VVLHPTGIFATNPDVLEPPDGDTLPEETTGKRGALSAKHQLLSYVSLLETNKPYLMNTMR
VPALQTMLLYARSLDTNQQCTRLIVDEWLEFCFADSEAAEDILPVVLHLRATWIKVLEMR
LKESQRSLNFGAADLRVVHLERLLARKLAEYLSSHVEYTMRKLGATDLQHLYIGSSGGLL
KSSDDEFFSTFSKDSEPHPTKGGWKVTDFMTYGW
NT seq 3705 nt   +upstreamnt  +downstreamnt
atgccacgtgacagaagtgacgaggaccgttaccgacgttcatcagatcattcccgccgt
catcatgaaaggagggatgaaagaaaatcgcatcacgagagtcacagagaaaggagttca
tattcagaacgttctcaaagagaggattacgaaagacatgactcttcttcaagacgacgt
gactctaatcacaggcacagatatgatgaaagtagttcacgctatgatgacactaagcat
gaatatcgtaaagagagggaagatggaacaagaaacaagataaaatcctcttccaggagc
agtccagagcgccaccgtgaaagaaggcctagtcgattctcggatctacatgtacggaag
ccatcttggaatttctatggttacacatcagatgatattaaggatgctgaaaaattacaa
aaggagagagacacaagtacttctaatagtggtggtactgttatctctactggtttacga
gcgtcatctgctttcactggcagttcatcaaatcagaatttggaacatcaagatcggaca
caggaggagatgaaacgaacagacaaacagagatctgaggaacaaggaaagccagaaaca
gagacttcttcagttgcatggtcattcgactgggatcgtcaccgctatgagttggataaa
ctcttctttgatgatgatggtgtcctaaaaagggggagttctgattatggtgacttttgg
tccttttttgagcgataccagtcattccagagcaaaaaacaagcaagattaggtagtcat
aaagccaaaaaaacagaagaggacaagcatgccaagactgggaagctgaaacttccacgg
acctttgacaaaagacacagcatcaacctagagatgactgtccccagcaagcacaccttg
aaatcctacagtcacgtgacagcaagtggagaagaaaaagatgagttgacatcggaaaga
gtcttggaattcaagaaagtgcttctgctctacttgggcttcaatcagaaacaacagttc
aacaaggtggtgaagttacgcaaggatcagtgtaaccttcccatagccaagtacagagaa
acaatcgttgaagctgtccgcaagaacagtgttgtgatagttgcaggagacacaggatgt
ggcaagtctacacaggtacctcagtacctaatgagtgcaggctttgactctgttgctgtg
acccaacccagacgtattgcctgtatctcattagcaaagagggtcgggtacgagaccctc
catgaatacggctcccaggtcggataccagattaggtttgagacgaccaagactcaggcc
accaaacttctcttcctcactgaaggactcctccttcgtcagcttcagttggatccggtg
ctctcacagtacagtgtgctcatcttggatgaagtccacgagcgtcatctccatggtgac
ttcctccttggtgtcctccggtgcatgatggagcagagggatgatctcaagctggttctc
atgtcggctaccatcaatatcaatctcttctcaaattatttcaaagatgcacctgtcatt
caggtgccaggaaggttgtatcctatacaagttgaatatgtgcctatcaaagaatcagag
cagggcagcaagtcagagagactggatgcccgaccctatctccgtatcatgcagcgcata
gaccacaagtacccagactctgagaggggagatctactagtctttctgagtggtgtgtct
gagatctcaagtgtagtagaggcagctaagatgtacgccagccaaaccaaccgatggatt
gttcttccgcttcacagctcgctctcggtcgctgagcaagataaggcctttgacatatca
ccagagggagtgagaaagtgcatcgtatcaacaaacattgcggagacttctgtgacaatc
gatggcgttcgattcatcgttgattcaggaaaggttaaagagatgaactacaactcacag
gctaagatgcagcagctgcaagaattttggatcagtcgagccagctccgaacagcgcaaa
ggtcgagcagggcgtacgggacctggggtgtgtttcagactttacggcgaggatgactac
gatgcttttcaagcctactccacgccagagatacaaagagttcctctagattcccttctg
cttcagatggtagcattgggtcttaaaagacctagagagtttccattcatcgaggcccct
cctgcaaacagcatcgagaactcaatcacatttctgaaggagcaaggagccctttctgag
aaggagaaacttacccctgttggtcgtatgctgtcacagctacctgtggatgtcgtcatc
ggcaagatgcttatcatgggaaccatctttaagatgattgatcctgtgttatcaatagct
gctgctctcagtgtacaatccccattcacaagcagagctcatagagatcatgatgctatg
agtgccagaaaatccttagagtcagatcacggcgatcccttcactctactcaatgcatat
gatgaatggatacagatgaaagcatccggaggttcatcatctcgtaaatggtgtaagagg
agaggattagaggagcagaggttctatgagatgtccaaactcaagaaacaattcaaagaa
ctcttagatactaacaatcttcttggtatgaaagatgcgaggcgagagtacagcagcctg
gagcgccagtctaggaatcgagagagaaagaggttgagagagctgaagaggaagactcag
aattcatccaaaaaaaggaaacttctcaaactagagaacgaggattttgatgacagtgat
gaagatgaagaaagtgatgatgatgcttctaagctccaagatatccagttcaagctgtct
catgatgtgacagagatggaggccaagtctaacatgaaccggagtctgttgaaccgagag
atcaacctgttgaaggtgatactgtgcagcgggctttatcctcaacttgccattgctgat
gactgtaactcgtaccgaaaggaatccgatcaggtcttccatacaaaggccaagccattt
gtcgttcttcaccccactggaatctttgctactaaccctgacgtactggaacctccagat
ggggacacgctaccagaggaaacaactggaaagagaggggcgctgagtgccaaacatcaa
cttctttcttacgtgtctctactggaaaccaacaagccctacttgatgaatactatgaga
gtacccgccttacaaaccatgttgctctatgccaggagtctggatacaaaccaacaatgc
actaggctgattgtagatgaatggttagagttctgctttgctgattccgaggctgcagag
gacattctaccggtcgtcctccatctgagagctacgtggatcaaagtcctggagatgagg
ctgaaagaatctcagaggagtctcaactttggagcagcggatctgagagtcgtccaccta
gagcgtctgctggccaggaagctggctgaatacctttccagccatgtcgaatataccatg
agaaaactcggtgctactgatctccaacacctctacataggctcctcaggtggactgctc
aagagttctgatgacgagttcttcagtaccttcagcaaggattctgagcctcatccaact
aaaggggggtggaaggtgaccgacttcatgacgtatggctggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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