KEGG   Strongylocentrotus purpuratus (purple sea urchin): 585199
Entry
585199            CDS       T01019                                 
Name
(RefSeq) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    585199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spu03019]
    585199
   03009 Ribosome biogenesis [BR:spu03009]
    585199
   03036 Chromosome and associated proteins [BR:spu03036]
    585199
Enzymes [BR:spu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     585199
Messenger RNA biogenesis [BR:spu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     585199
Ribosome biogenesis [BR:spu03009]
 Eukaryotic type
  90S particles
   RNase
    585199
 Prokaryotic type
  rRNA processing factors
   585199
Chromosome and associated proteins [BR:spu03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     585199
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 dsrm
Other DBs
NCBI-GeneID: 585199
NCBI-ProteinID: XP_030854036
Position
Unknown
AA seq 1683 aa
MHSQHPPPDQRPERPPYNPQLSLGPYSRPPPPGGPGPVSFGQNQVQRPRGPPLGPPLGPH
PGSQGPLFGHQGQYPPPSGVPPNWHGDRPPPGRGDIAFPHRPPPQLPPFTGPPPHLPFPN
GPPPGPRMQIPPPGGDFRMRPPPPFHTQRLPNAPHLPPPPLDFCNRPGNPGIPPTGFDHP
GDRQAGQGLQGPRDQCVPGASHQDHQFLQPDAVPSFRDRVSSQQASSSLDSPHEHHRGSQ
RPQDSSRHQGYGADEKGPRFRDLGEYQKTYTDSRSSDCDRKRPADDHNRRDREGFGKDAS
RDQLARDSRGSDSRDHSRRQRDRSRERTSRRERSRSPRQGRRGDRGRTREKSPSRENSSR
RDQSTGGSSSKERSRSPRRHESSSRERGSHRSSSPQRSKSRRAEGHDLQDSKRSRSPSRD
QRPRSPSRDQRPREREGSLQRHSSRKPEGQITDPSKTCQRWNDLERELREEELEENDEDK
DPLEDSDPEEWGTDDTPWIQCSPRENFYSINPSDQISASSVAGTEKLKELLKRFEAEIIE
RGPRVRAKQPQPEEKKPELHWHVHSHGHHSASESSDSESDSDTSSGEEDKDYDFRISCLE
NRANHPWRLAENLWFNQPGEMNDGPLCKCSIKQKKSGIRHNIFPGEKPVPICEQHTNNAS
KLHHYRVTISPTTNFLTTTQTVIVFDKREYIFEGFSLFSHHSLDEVPECKVVRFGREYTL
HFFPEPLPEHFTVKGLDLFARFLFEEILELWDFDFKGKENGCHHFHFMPRFARLLPNNGK
EILSMHHVIQYLIRSNKPIIDPAKLDDWLAVSETAWQRYVDKLQHMIATRPGKKPSSIRI
DQLDRDQMNPDKKTFPVVVHFGVRPAQLSYIGDPNYRKLLKSFTRLRHLLLNKPRVTEAD
KEKLAEKEAKLQRIRVQGSRVREVTAEVSSEHMLATGVGVDICQHALMLPVLVNHLRYFA
CLNSLYQVLGYKFQDPMLLRFAMTHPSYKLYFGTTPDHVRNSLYNCGIRCRQDHTEHKKV
LAKERKKGINQLYRIMSLMASNDELPSHIKNYERLEFLGDAVIEFISSTHLYHLFPDLEE
GGLATYRMALVQNQHLSVLAKKLELDKYMLYAHGPDLCRPYDLRHAMANCLEAVMGAIYL
EAGLDLCRKIFGKLLFEEEYLQTIWLNHPKDPLQADFPETDRHLIKNSEVLQKLTVFEGD
TGMRFTHIRLLARAFTQRTVGYTNLTMGSNQRLEFLGDSVLQLVVSSYLYKHFPNHHEGH
LSLLRSSLVNNKTQSIIAQDLGLVEYIIEPKTRSRNENNIPMKIMADLVEALIGAMYVDH
GLEVVSTFCSVVFYPRLKDFIQTQHWNDAKSQLQQCCLTLRVEGQEPDVPNYKVIGQSGP
TNSRQYSVAVYFKSKRMSTGTASNIRDAEMEAAKNALRKGNFPHLWFQRKCVMLRKQREA
MREEEKMKEDEERRGKGEEKEGENGVKRGGSDSRGRRDDGRMDSSRGEGRRDERRRDEGR
RDDGRRDDGRRDDGRRDDRRREDRRDERRKEEGRRDDKRREERSRDEGRMGERRDERRNE
RRDDERRDEKSRDERKRDERRRDDRKDGEDRLRRERDRTLSSRDVKNRDEERSRNDQEKK
EDVRKEGGLPNEPTGRRRDEISQERRKEGDKSKREEGNNPRRESQTNTTLNEGVRNEERK
DCR
NT seq 5052 nt   +upstreamnt  +downstreamnt
atgcactcccagcatcccccaccagatcaacgacctgagaggcccccctacaaccctcag
ctctccttaggaccttactcaaggcctccccctccaggaggaccaggtcctgtgagcttt
ggtcagaatcaggtccagagacccagaggaccacctttaggaccacccttaggacctcat
ccgggatcccaaggacctttgtttggacatcaaggacagtatcctcctccatctggagtg
cctccaaattggcatggagaccgacctccaccaggcagaggagacatagctttccctcat
aggcctccacctcagttaccaccctttacagggccaccaccccatttgcccttcccgaat
ggcccacctcctgggcctaggatgcaaattccaccccctggaggggattttagaatgaga
ccaccacccccatttcacacccagagactccctaatgcaccccacttgccaccacctcca
ttggacttctgcaatcgtccaggaaacccagggataccgccaacaggattcgatcatcca
ggggatcgacaggcgggccaaggtcttcaagggccaagagaccagtgtgttccgggtgct
tctcatcaagaccaccaatttctgcaaccggatgccgttccgtcattcagagacagagtc
tcaagtcagcaagcctcatcctccctggattctccacatgaacatcacaggggatcacaa
agaccacaggactcctcaaggcatcaggggtatggtgcagatgaaaaaggtccaagattt
agagatcttggggaataccaaaagacatacacagactctagatcttcagactgtgataga
aaaaggcctgcagatgatcataatcgaagagacagagaagggtttggaaaggacgcatct
agagatcagttagctagagacagcagaggttcagattccagagatcattctcgtcggcaa
agagacaggtccagggaaagaacatcgaggagagagaggtcacgatctcccagacaaggt
cgtcgtggagacagaggcagaacgagggagaaaagtccgtccagagagaatagctcaagg
agagaccaatcaacaggtggttctagcagcaaagaaagatccagatcacctagaaggcat
gagagttcctcaagggaaagaggttcacacaggagcagcagccctcagaggtctaaatca
aggagggccgaaggtcatgacctgcaggatagcaaaagatctcgaagcccttctagggat
caaagacctcgaagcccttctagggatcaaagacccagggagagagagggatcattgcaa
aggcatagcagtaggaaacctgaagggcaaatcacagatcccagcaaaacctgccagcga
tggaatgatctggagagagaactgcgagaggaagaacttgaggagaatgatgaggataag
gatccccttgaagattctgaccctgaggagtggggtacagatgacaccccttggatccaa
tgctccccaagagagaacttctactctattaatcccagtgatcaaattagtgctagttct
gtagctggtactgagaaactgaaggaactcttgaaacggtttgaggcagaaatcattgag
cgaggacctcgtgtcagagccaaacagccacagccagaggagaagaaaccagaactccat
tggcacgtccattctcatggccaccactcagcaagcgagagtagcgatagtgaatctgat
tcggacacctcgtctggcgaggaggacaaagattatgatttccgcatctcatgtctggag
aacagagctaatcatccatggcggctggctgagaatctatggttcaatcaaccaggagag
atgaatgatggtcctctgtgcaaatgtagcatcaaacagaaaaagtcaggcatcaggcat
aacatcttcccaggagagaaacctgttccaatctgtgagcaacataccaacaatgcatcc
aaactacatcactacagagtcaccatctcccctactacaaacttccttaccacgactcag
acggtcattgtctttgacaaacgagaatacatctttgaaggattctctctcttctcgcat
cactctttggatgaagtacccgaatgtaaggtggtccgctttggccgggagtacaccctt
cacttcttcccagagcctctgcctgagcactttacggtgaaaggcttggatttatttgca
aggttcttgtttgaggaaatcctggaactttgggattttgattttaaaggaaaagagaat
ggatgccatcacttccatttcatgcctcgctttgcccgcctccttcccaacaacggcaag
gagatcctctccatgcaccacgtgatccagtacctgatccgcagtaacaagcccatcata
gatccggccaagctggacgactggctggcggtcagcgagaccgcttggcagagatatgtg
gataagcttcagcatatgattgccacacgcccagggaagaaaccgtcatcgatacgcatt
gatcagcttgaccgagatcagatgaatccagataagaagacctttcctgtcgtcgttcat
tttggtgtccgtcctgcccaactctcttacattggagaccctaactatcgtaagctgctc
aagtccttcacccgtttgcgtcacctcctgctgaacaagcccagagtgactgaagctgat
aaggagaagctggctgagaaagaggccaaactgcagagaatccgcgtccagggaagcagg
gtgcgggaggtcaccgcggaggtcagcagtgaacacatgctagccactggtgtaggagtt
gatatatgtcagcatgccctgatgcttccagttcttgtcaatcatctacgctactttgcc
tgtctcaacagcctctatcaggtcctgggctataagttccaggatcccatgttgctaagg
tttgcaatgacacatccgtcttacaagctgtactttgggaccacacccgaccacgtgcgg
aactctctttacaactgtggaatccgctgtagacaggatcatacagaacacaagaaggtg
cttgccaaggaaagaaagaaaggaattaatcagctgtatcgcattatgtccctgatggct
tccaatgatgaactaccatcccacatcaagaattacgagcgtcttgagttcctaggggat
gctgtgattgagttcatatccagcacccacctctatcacctcttcccagaccttgaagaa
ggtggtctagccacctaccgtatggctctggtccagaaccaacatctctcagtcctagca
aagaaacttgagctggacaagtacatgctctatgcacacgggcctgacctctgccgacct
tacgaccttcgacacgccatggccaactgcttggaggcagtcatgggagcaatatatctg
gaggcggggctggatctatgtcggaaaatctttggcaaactgctctttgaggaagaatat
cttcaaactatctggcttaatcatcctaaggaccctctgcaggctgattttcctgaaaca
gacaggcacttgatcaagaattcagaagtgctgcagaaactgacagtatttgaaggggac
acagggatgcgcttcacgcacattcgacttctcgccagagcgttcacccagaggactgtg
ggatataccaatttgaccatgggttccaaccagagacttgagttccttggagattccgtg
ctacagcttgttgtctcctcatacctctacaagcatttccccaatcatcatgaaggacac
ttatcgctcttgaggagttctctggtcaacaacaagacccagtccatcatagcccaggac
ctgggactcgttgagtacatcatagagcccaagaccaggtccaggaatgagaacaacatt
cctatgaagatcatggctgatcttgtagaagccctgattggtgctatgtatgtggaccat
ggactagaagttgtttctacattttgcagtgttgtcttctatcccagactgaaggacttc
atccagacacagcactggaacgatgctaagtcccagctccagcagtgctgcctgactcta
cgggtggaaggtcaagaaccggacgttccaaactataaggtcatcggccagagcgggcca
acaaattctcgccagtactctgtggctgtatacttcaaatccaagcgaatgtcgacaggg
acggcctcaaatatccgggatgctgagatggaggcagcgaagaacgccttgaggaagggg
aacttcccgcatctctggttccagcggaagtgtgtgatgttgcggaagcagagggaggcc
atgagagaggaggagaagatgaaggaagatgaggaaagaaggggcaagggagaggagaaa
gaaggagagaatggagtgaagagagggggtagtgattcgaggggcaggagggacgatgga
aggatggattcctcaagaggtgaaggaaggagagatgaaaggaggagggatgaaggaaga
agagatgatggaaggagagatgatggaagaagagatgatggaagaagagatgacaggaga
agggaagataggagagatgaaagaaggaaagaggagggaaggagagatgacaaaagaaga
gaagaaagaagtagagatgaaggtaggatgggggaaagaagagatgaaagaagaaatgaa
agaagagatgatgaaaggagagatgaaaaaagtagagatgaaagaaagagagatgaaagg
agaagagatgacagaaaagatggggaagatagactcaggcgcgagagagaccgcactctc
tcttcaagagatgtcaaaaacagagatgaagagaggagtagaaatgatcaggaaaagaaa
gaagatgtaaggaaggagggaggacttccaaatgaaccaacaggcagaaggagagatgag
attagtcaagagagaagaaaagagggagacaagtctaaaagagaagagggtaacaatcca
agaagagaaagtcaaacgaatacaaccttgaatgaaggagtaagaaatgaagaaagaaaa
gattgtagatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (181)   
   KEGG ORTHOLOGY (1)   
   RefGene (177)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (196)   

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