KEGG   Strongylocentrotus purpuratus (purple sea urchin): 585924
Entry
585924            CDS       T01019                                 
Name
(RefSeq) ATP-dependent RNA helicase abstrakt
  KO
K20096  ATP-dependent RNA helicase DDX28 [EC:5.6.2.7]
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:spu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spu03009]
    585924
Enzymes [BR:spu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     585924
Ribosome biogenesis [BR:spu03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   585924
SSDB
Motif
Pfam: Helicase_C P-loop_SecA
Other DBs
NCBI-GeneID: 585924
NCBI-ProteinID: XP_030845649
Position
Unknown
AA seq 417 aa
MVGATMPRKATNILAEIIPPENLEVISTPHVHRIMPHVHQKFLRLHSEDKALKILELVKR
EQKRRVPMMVFCNMASTCDWLAHILTENGIPALRLHSKMGGKSRSGVMEAFKSGDAHILV
CSDIASRGVDTVQVQHVVNLDFPPFTSDYIHRAGRVGRVGSQGSGHVTNFVVHKWDVELV
NKIEDTSVIIPSLLAGLSLKVDGYIAIQGGVQQVEVYMPLQYPTYELNIWDSDGLVLSDN
VGLPKLTFQVNVTDGVEMCQQDEDGEDREMPVTLQPFKGTPLIISDLQKKNDIMLGKKIQ
ERHCQVVRLAGGAPGIRFVKGKKVKNGDLDKNISLHNVSNNIVKKVSVKDGCLYRNSKNI
KQSLQSNRQRRGTLQALCVSPGHNRWERREVRLISKPSFIAKNQTPLSGPLEIFLVL
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggtaggggccaccatgccacgcaaggccaccaatatcctggctgaaatcattcctcct
gagaatctagaagtgatttctacccctcatgttcatcgtatcatgcctcatgtacatcag
aagttcctcaggctgcactcagaagacaaagcactcaagattcttgagctggtgaagaga
gagcagaagagacgtgtacccatgatggtattctgtaacatggcatccacttgtgattgg
ttagctcacatcctcacagagaatggcataccagccctcagactacactctaaaatgggt
ggcaagtctcgtagtggagtaatggaagcattcaaatcaggtgacgcccacatcttggtc
tgttcagatatagcttcaagaggagtggatacagttcaggtccagcatgtggtgaacttg
gacttccctcccttcacgtctgactacatccatcgggcagggagggtggggcgcgtcggg
agccaggggagcggccatgtcaccaactttgtggttcacaagtgggatgtggagctggtc
aataagattgaggacacctcggtcattattcctagccttctggccggccttagtttgaaa
gttgacggttacattgctatacaaggaggggttcaacaggttgaagtctacatgcccttg
caatatcccacttatgagctcaatatttgggacagtgacggtcttgtactaagtgacaat
gtcggactccccaaactaacttttcaagtcaacgttaccgatggtgttgagatgtgccaa
caagatgaggacggtgaagaccgtgagatgccagttactctgcaacctttcaagggtact
cctctcatcatctctgatcttcaaaagaagaatgatatcatgttggggaagaaaattcag
gaaaggcattgccaggttgtgagactcgctggaggcgctccgggtatcaggtttgtcaag
ggcaaaaaggttaaaaatggcgatctcgataaaaatatatcactgcacaatgtatcaaac
aatatagtaaaaaaggtttctgtgaaagacggatgcttataccgaaatagcaagaacatc
aaacaaagtttacaaagcaatcggcagaggaggggcacccttcaggccctctgtgtttcg
ccaggccacaaccgctgggagaggagggaagtgaggcttatttctaagccgtcattcatc
gctaagaatcagactcctttgtccggtccgttagagatcttccttgtcctttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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