KEGG   Strongylocentrotus purpuratus (purple sea urchin): 588512
Entry
588512            CDS       T01019                                 
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
  KO
K03163  DNA topoisomerase I [EC:5.6.2.1]
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:spu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spu03032]
    588512
Enzymes [BR:spu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     588512
DNA replication proteins [BR:spu03032]
 Eukaryotic type
  DNA Topoisomerases
   588512
SSDB
Motif
Pfam: Topoisom_I Topoisom_I_N Topo_C_assoc Tcp10_C
Other DBs
NCBI-GeneID: 588512
NCBI-ProteinID: XP_030831651
Position
Unknown
AA seq 956 aa
MSSKVDKIRSDNHSSGSPAKKPLTNSHNTSSSKHRDPNAKPSSKSKEGGAVKVILLSDGT
KIKTMPDGSKIKVMPDGRKFKMKPPTSSMAPKQNNSSHSSKPKGGSPPPKPSSNSARPEK
PPHKLSHNDSISRKEDGKHKEPPKPSSSSIRPKEKSSSSKDINSKHKEHSSSKHEASKHS
NSSKPKVEPKKEKPEVKEEMASPPRIKEESRTPEKHSKKEASSPVKSLKKESLSEEEGGD
DDDDDVPLNQRFDDNVKSESRRSTKRPRYAENDEEEDDEEDDVPLSERKGSAKKVKHEEP
VKKSSSKKRKHHESEEDYSAGEEDEEDDYKPLAKQKKEEKTKSKKKSKDTKKDKKDKKDT
SRSKAKTGRGAKVEVKKEKGGGRKKKEEEKQEVWEWWKETPHPEGVKWMFLEHTGPLFAP
PYEPLPSSVKFFYDGEEMKLSEEAEEVAGFYARMIEHDYTTKDVFNNNFYRDWKKVMTHE
EKAIIKDMKKCNFKQIHAYYQRKSEERKAMSKEEKQENKRKNEEIQKEYGFCSFDGHKEK
IGNFRVEPPSLFRGRGEHPKQGQLKKRIGPEDVIINCSKDSKWPIPPEGHKWKKVIHENS
VTWLASWTENIQGAIKYVMLNPSSRIKGEKDWAKYETARKLKESVDRIRNEYREDWKSKE
MRVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIQLYEEQDGMEFVVKFDF
LGKDSIRYENSVPVEKRVFKNLKLFTENKKGEDNLFDRLNTSILNKYLQELMEGLTAKVF
RTYNASSTLQNQLVELTDADDSVTAKMLSYNRANRAVAVLCNHQRAAPKTFDKQMENLQE
KIDKKHLDIKEAKKGLKAIKSEYKNSRNEKLKLAMEKKAKQVERLVEQLAKLEMKATDKE
ENKEIALGTSKLNYLDPRISVAWTKKWDVPIEKVYNKTQRDKFRWAVDMAGADFVF
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgagttcgaaagttgacaaaataagatctgacaaccattctagcgggagcccagccaag
aaacccctaaccaatagtcacaacacctccagctcaaagcatagagatccaaatgccaag
ccaagctccaagtctaaagaaggcggggccgtcaaggtcatcttgctcagcgatggcacc
aagattaaaacaatgcccgacgggagcaagatcaaggttatgcccgatgggcgcaagttt
aagatgaagcccccaacgtcgtccatggccccgaagcagaataacagttcacattccagc
aagccgaagggcggatccccgccaccgaaaccctcgtcgaattcagccaggccggagaaa
ccaccgcacaagctgtcacacaatgatagcattagccggaaagaagacgggaagcataaa
gagccaccgaagcccagtagttccagtatacgccctaaagagaaatcgtcctcatccaaa
gacatcaactccaaacacaaagagcactcttcttcgaagcatgaagcctccaaacattct
aattcatccaagcctaaggttgagcccaagaaggagaagccagaggttaaagaagaaatg
gccagtccacctcggattaaagaagagagtaggacacctgaaaagcacagcaagaaagaa
gccagcagccctgtcaaatctttgaaaaaagagtctttgagtgaggaagaaggaggagat
gatgatgatgatgatgtacctttgaaccagcggtttgatgacaacgtcaagtcggagtca
aggagatcaaccaagaggccacgttatgctgaaaatgatgaggaggaagatgatgaggag
gatgatgtccccctgtctgaaaggaaagggtcagctaagaaggtgaagcacgaggagcct
gtcaagaagagctccagcaagaagaggaaacaccatgagagcgaggaggactacagtgca
ggggaagaggatgaggaggatgattacaaacctttggccaagcaaaagaaggaggaaaaa
acaaaatcgaagaagaaatcaaaggacaccaagaaagacaagaaggataagaaggatact
agtcgttccaaagcgaagacgggtcgaggagcaaaggtagaggtgaagaaggaaaaggga
ggaggaaggaagaagaaagaggaagaaaaacaagaggtttgggaatggtggaaggagacc
ccacatcctgagggagtcaaatggatgttcctggagcacacaggacccttgttcgcccct
ccatatgaacccctgcctagcagtgttaaattcttctatgatggagaggagatgaaactt
agtgaagaggctgaggaagtggccggattctatgccaggatgattgaacatgactacact
accaaagatgtctttaataacaacttttatagggactggaagaaggtgatgacccatgag
gagaaagccattatcaaggatatgaaaaagtgcaacttcaagcaaattcatgcctattat
cagaggaaatcagaggagaggaaagctatgagcaaagaagagaaacaagaaaacaagagg
aagaatgaggagatccagaaggagtatggcttctgctcctttgacggtcacaaggagaag
atcggcaacttcagggtggagcccccgagtttgttccgaggtcgcggggagcatcccaaa
caaggccagctcaagaagaggataggacctgaagatgtcatcatcaactgtagcaaggac
tcaaaatggccgattccgcctgaaggtcacaaatggaagaaggtaatccatgagaactca
gtgacctggctagcttcatggactgagaatatccaaggagctatcaagtatgtcatgttg
aatcccagctcaagaataaagggtgagaaggattgggccaaatatgaaacggcaaggaag
ctcaaagaatcggtggacaggatccgaaacgagtatcgagaggactggaagagtaaggaa
atgagggtcagacagcgtgccgttgccttgtacttcatcgacaagcttgcattgagagct
ggtaatgagaaagaggaaggagagacggccgatactgttggttgctgttcattgagagtg
gagcacattcagctgtatgaggagcaggatggcatggaatttgtggtcaagtttgatttc
ttgggtaaagattcgatcaggtacgagaactctgtccctgtggagaagagggtcttcaag
aatctgaagctgttcacagagaacaagaagggagaggacaacctgtttgatcgtctcaac
accagtatcctcaacaagtacctgcaggagctgatggagggtctcactgccaaggtcttc
aggacgtataacgcatcctccactctgcagaaccaactggtcgagcttacagatgctgat
gactctgtcactgctaagatgctctcctacaaccgtgccaaccgtgccgtggcagtcctg
tgtaaccatcagcgcgctgcccccaagaccttcgacaagcagatggagaacctccaggag
aagattgacaagaagcatctcgacatcaaggaagctaagaaggggctcaaggccatcaag
agcgagtacaagaacagccgcaatgagaagttgaaattggctatggagaagaaagcgaag
caggtagagcgtctggtggagcagcttgccaagctggagatgaaagctacagacaaggag
gagaacaaggagatcgccttgggaacctccaagctcaactacttggatcctaggatatcg
gtggcatggaccaagaaatgggatgtgcctatcgagaaggtgtacaacaaaactcaacga
gacaaattccgatgggccgttgacatggctggagcagactttgtattttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (105)   
   KEGG ORTHOLOGY (1)   
   RefGene (101)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (124)   

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