KEGG   Strongylocentrotus purpuratus (purple sea urchin): 593673
Entry
593673            CDS       T01019                                 
Name
(RefSeq) THO complex subunit 5 homolog A isoform X2
  KO
K13174  THO complex subunit 5
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    593673
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spu03019]
    593673
   03041 Spliceosome [BR:spu03041]
    593673
Messenger RNA biogenesis [BR:spu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     593673
Spliceosome [BR:spu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    593673
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 593673
NCBI-ProteinID: XP_798236
Position
Unknown
AA seq 699 aa
MSAPTVKKRRILSKTDDEQSRSSSPKRESKKAVHVKVKREQSPYDEEKEVAARDKEKDLQ
LHNETSTKLRNLMADIHAYKSKEQSGKDDEIDEKQKEVALLFVTLKKLNRVSHLRCKKAR
DETQGAKQKVDNLHLQLQNLLYEVMHLQKEITKCLEFKSKDEDIELVDVETFFKEAPPSI
SKPSTTKHDEHKLQLARLDWELEQRKRLSEQYKARQGNRDGVAKSIHQKKDYLESLQPRL
SNILEATIPVQQHLSMPFNEIRSQHQLAKLLPRPLYFLYVQANAYHEACDGSMSLKIEGD
AETASSTLSASNEDEEDSDSDSEETLSESKRRRKTMGDKLEEQRQKILAKHPLQVIMTLR
FKGGTLLTLTFNYMMVLQIITVNVDIKLGGSVQQVANSASGLLSPSNLLSLLFPGDDGKE
SPKTTNAYQLSKIGMNDLASYIGQIGHPYRWVQWLGGLDFLSDSGGNTVKASAALSNSHM
ESTVKALKSRVKARLTLNQQLLSLEGKTIAVPAASINLFPTKICSSLKSWTTITAEDFQV
IPFLRGHPSADRLDDSHTIFQAMMERGSAKLQVLILLGLDYPNQPPHFILNLQWVGQRNS
NNDLHIRDMEAELNIHYGELIGKTTVNHLMTNQLQRVLMCLDVYLETQQGRRRDEQAVGG
TEGPTEFVMEKMYTRVTRGRNRSKPFKYNSLQGYFMQRL
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgtcggcgcctactgttaagaaaagaagaattttatcgaaaactgatgatgaacaaagc
agaagttcatcaccgaagagagagtcgaaaaaggcagtacatgtcaaagtcaaaagggag
cagtctccatatgatgaagagaaagaagtagcagcccgagacaaggagaaggatctacag
cttcacaatgagacctctacgaagctaaggaacttgatggctgacatccatgcctacaaa
tctaaggagcagtcagggaaggacgatgagattgatgagaagcagaaagaagtggccctc
ttgtttgtaactctgaagaaattaaatcgtgtgtctcatctccgatgtaagaaggctcgg
gacgagacccagggagccaagcagaaggtggataacttgcatcttcagcttcagaaccta
ctctatgaggtcatgcatctacagaaggagatcacaaagtgcctcgagttcaagtccaag
gatgaagacattgagttagtggatgtggaaacgttcttcaaagaagctcctcccagcatc
tctaaaccctccaccacaaagcatgatgaacacaagctacaattagccaggctagattgg
gaattagagcaaaggaaaagattgtccgagcagtacaaggccaggcagggaaaccgtgat
ggagtggctaagagtatacaccagaagaaagattacctggagagcttacaaccaagactc
tctaatattcttgaggctaccatccctgttcagcagcacttatcaatgcctttcaatgag
atccgatctcagcaccagctagccaagcttctacccaggccactatacttcctctatgtg
caggccaatgcataccatgaagcttgtgatggatctatgagtctgaagatagaaggtgat
gcagagactgcatcctctactctctctgcttccaatgaggatgaggaggatagcgactca
gatagtgaagaaacactgtctgaatcaaaacgcaggagaaagacgatgggagacaagctg
gaagaacagagacagaagattcttgccaagcatcctctacaagtcattatgactctcaga
ttcaaaggtggtactttactgactttaacattcaactacatgatggtgcttcagatcatt
actgttaatgtagacatcaagcttggtggttctgtacagcaggttgccaactcagccagc
ggtctcttgtcgccgtcaaatctgctgagcttgctgttcccaggggatgatgggaaggaa
tcgcccaaaacaaccaacgcctatcagcttagcaagataggaatgaatgacctggcctcg
tacattggtcagatcggtcatccataccgctgggtccagtggttaggtgggctagatttc
ttatcagacagtggtgggaacacggtcaaggcctcagcagccctcagtaacagtcatatg
gagtcaacggtcaaggccttgaagtccagggtcaaggccagactgacactcaatcagcag
ctgctcagtctagaagggaaaacaatagcagttcctgcagcctctatcaacctgttccca
accaagatctgttcatctctcaaatcctggacaacaataactgctgaagacttccaggtt
attccattcttgagagggcacccttctgctgacagactggatgactcgcatacaatcttt
caagctatgatggagcgaggctcagccaagctacaggtattgatactgctcggcctagac
taccctaaccagccacctcattttattctcaatcttcagtgggtaggacaacgcaactcc
aacaacgatctccacatcagggatatggaggccgagttaaacatccactatggtgagctg
atcggtaagacgaccgtcaaccatctgatgactaaccagcttcagagggttcttatgtgt
ctggatgtgtacctagagacccagcaggggcgcaggagagatgaacaggcagtaggaggt
acagagggaccaacagagtttgtcatggagaagatgtatacaagagtgacgaggggtagg
aatcgatccaagccattcaagtacaactctctgcagggatacttcatgcaacgtctttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (52)   

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