KEGG   Sphingobium sp. YG1: YGS_C1P1515
Entry
YGS_C1P1515       CDS       T05858                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
spyg  Sphingobium sp. YG1
Pathway
spyg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spyg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    YGS_C1P1515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spyg03019]
    YGS_C1P1515
   03110 Chaperones and folding catalysts [BR:spyg03110]
    YGS_C1P1515
   03029 Mitochondrial biogenesis [BR:spyg03029]
    YGS_C1P1515
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spyg04147]
    YGS_C1P1515
Enzymes [BR:spyg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     YGS_C1P1515
Messenger RNA biogenesis [BR:spyg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     YGS_C1P1515
Chaperones and folding catalysts [BR:spyg03110]
 Heat shock proteins
  HSP60 / Chaperonin
   YGS_C1P1515
Mitochondrial biogenesis [BR:spyg03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    YGS_C1P1515
Exosome [BR:spyg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   YGS_C1P1515
  Exosomal proteins of other body fluids (saliva and urine)
   YGS_C1P1515
  Exosomal proteins of breast cancer cells
   YGS_C1P1515
  Exosomal proteins of colorectal cancer cells
   YGS_C1P1515
  Exosomal proteins of bladder cancer cells
   YGS_C1P1515
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: BBD00260
UniProt: A0A2Z6AEF2
Position
1:complement(1638877..1640523)
AA seq 548 aa
MAAKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVIKVVEDIKSRSKPVSGSAEVAQVGIISANGDREVGEKIAEAMEKVGKEGVITVEEA
KGLDFELDVVEGMQFDRGYLSPYFITNPEKMAVELADPYILIHEKKLSNLQSILPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTKGEV
ISEDLGIKLESVTLGMLGTAKRVTIDKDNTVIVDGAGDSDSIKGRTEQIRSQIENTTSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALTGLTGVNDDQTRGIDIVRKSLTALVRQIASNAGHDGAVVSGKLLDQDDTSFGFN
ASTDVYENLVAAGVIDPTKVVRTALQNAASVAGLLITTEAAVSELPADDKAPMGMPGGGM
GGMGGMDF
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcagcgaaggacgtaaagttttcgcgtgacgctcgtgagcgcatcctgcgcggcgtc
gacatcctggccgacgcggtcaaggtgaccttgggcccgaagggccgcaacgtcgtcatc
gacaagagcttcggcgcgccccgcatcaccaaggacggtgtttcggtcgccaaggaaatc
gaactgaaggacaagttcgaaaacatgggcgcccagatggtgcgcgaagtggcttcgaag
accaacgacatcgccggtgacggcaccaccaccgcgaccgtgctggcccaggccatcgtg
cgcgaaggcatgaagtcggttgccgccggcatgaacccgatggacctgaagcgcggcatc
gacctcgccgtcatcaaggtcgtcgaagacatcaagtcgcgttcgaagccggtttcgggt
tcggccgaagtcgcccaggtcggcatcatctccgccaacggtgaccgtgaagtcggcgag
aagatcgccgaagccatggaaaaggtcggcaaggaaggcgtcatcaccgtggaagaggcc
aagggtctcgacttcgaactggacgtcgtggaaggcatgcagttcgaccgcggctacctg
tcgccctacttcatcaccaacccggaaaagatggctgtagagctggctgatccgtacatc
ctgatccacgaaaagaagctgtcgaaccttcagtcgatccttcccatcctggaagccgtc
gttcagtcgggccgtccgctgcttatcatcgcggaagacattgaaggcgaagcgctggcg
accctggtcgtcaacaagctgcgcggtggcctgaaggtcgcggctgtcaaggcgcctggc
ttcggcgatcgtcgcaaggcgatgctggaagatatcgctgtcctgaccaagggcgaagtg
atttcggaagacctgggcatcaagcttgagtccgtcacgctcggcatgctcggcaccgcc
aagcgcgtcaccatcgacaaggacaacactgtcatcgtcgacggcgctggcgacagcgat
tcgatcaagggccgcacggagcagatccgttcgcagatcgaaaacacgaccagcgactat
gaccgtgaaaagcttcaggaacgtctggcgaagcttgctggcggcgtggccgtcatcaag
gtcggcggcgcgaccgaagtggaagtcaaggaacgcaaggaccgcgtcgacgacgccctg
cacgccacgcgcgcagccgtcgaagaaggcatcgtccccggtggcggtacggctctgctg
tacgcaaccaaggcgctgaccggtctgacgggcgtcaatgacgaccagacccgcggcatc
gacatcgtccgcaagtcgctgaccgctctggttcgccagatcgccagcaacgccggtcat
gacggcgccgtcgtttcgggcaagctgctggatcaggacgacacctcgttcggcttcaac
gcttcgaccgacgtgtacgaaaacctggtcgccgccggcgtcatcgacccgaccaaggtc
gtgcgcaccgcgctccagaacgctgcctcggttgctggtctgctgatcaccaccgaagcg
gccgtttcggaactgcccgccgacgacaaggcgccgatgggcatgcccggcggcggcatg
ggcggcatgggcggcatggacttctga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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