KEGG   Streptococcus pyogenes MGAS5005 (serotype M1): M5005_Spy0084
Entry
M5005_Spy0084     CDS       T00262                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' chain
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
spz  Streptococcus pyogenes MGAS5005 (serotype M1)
Pathway
spz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:spz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    M5005_Spy0084 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spz03021]
    M5005_Spy0084 (rpoC)
   03400 DNA repair and recombination proteins [BR:spz03400]
    M5005_Spy0084 (rpoC)
Enzymes [BR:spz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     M5005_Spy0084 (rpoC)
Transcription machinery [BR:spz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     M5005_Spy0084 (rpoC)
DNA repair and recombination proteins [BR:spz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      M5005_Spy0084 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 Peptidase_M23 FUSC
Other DBs
NCBI-ProteinID: AAZ50703
UniProt: P0C0E0
Position
97828..101469
AA seq 1213 aa
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEPKSLLTEREYREKLQEYGHGSFVAKMGAEAIQDLL
KRVDLAAEIAELKEELKSASGQKRIKAVRRLDVLDAFNKSGNKPEWMVLNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVAKEYAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDAGREGEGMIFKDKDEAVMAYRNGYAHLHSRVGI
AVDSMPNKPWKDNQRHKIMVTTVGKILFNDIMPEDLPYLQEPNNANLTEGTPDKYFLEPG
QDIQEVIDRLDINVPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVG
IADIPVIDNKAEIIDAAHHRVEEINKAFRRGLMTDDDRYVAVTTTWREAKEALEKRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRAITDGKEVTETL
EERLQGRYTRKSVKHPETGEVLIGADQLITEDMARKIVDAGVEEVTIRSVFTCATRHGVC
RHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGNVVEIEEDASTRTKKVYVQGKTGMGEYVIPFTARMKVEVGDE
VNRGAALTEGSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRVMDPGDTDLLPGTLMDISDFTDANKDIVISGGIPATSRPVLMGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNIEPQAMNEIEVIDHT
EVSAEAVFTAEAE
NT seq 3642 nt   +upstreamnt  +downstreamnt
gtggttgacgtaaatcgttttaaaagtatgcaaatcacattagcctcaccaagtaaggtc
cgttcatggtcttatggtgaagttaaaaaacctgaaacaatcaactaccgtacattaaaa
ccagaacgtgaaggactctttgacgaagtcatctttggtccaacaaaagactgggaatgt
gcgtgtggtaagtacaaacgtatccgttataaagggatcgtttgtgatcgctgtggggtt
gaggtaactcgtgctaaagtacgtcgtgaacgtatgggtcacattgagttaaaagctcct
gtatcacatatctggtatttcaaagggattccatctcgtatgggattgactcttgatatg
agtcctcgtgcccttgaagaagtgatctattttgcggcttatgtggtcattgatccaaaa
gatacaccgcttgaaccaaaatcattattaacagaacgtgaataccgtgaaaaactacaa
gagtatggtcatgggtcatttgtcgctaagatgggtgctgaagccattcaagatctcttg
aaacgtgtggacttggcagctgaaatcgctgaattaaaagaagagttgaaatctgcttct
ggtcaaaaacggattaaagcagttcgtcgtttagacgtccttgatgcctttaacaaatct
ggaaataaaccagaatggatggttcttaacatcctgccggttattccaccagatcttcgt
ccgatggttcaattggatggtggtcgttttgcggcatcagacttgaatgacttgtaccgt
cgtgtgattaaccgtaataaccgtttggcacgtttgttagaacttaatgcccctggcatc
attgttcaaaatgaaaaacgaatgcttcaagaagccgttgatgctttgattgataatggt
cgtcgtggtcgtccaatcactggaccaggaagtcgtccattgaaatcattgagccacatg
cttaaaggtaaacaagggcgtttccgtcaaaacttgcttggtaaacgtgtagacttctct
ggacgttccgttatcgctgttggtccaacccttaaaatgtatcaatgtggtgtcccacgt
gaaatggctatcgagctttttaaaccatttgtaatgcgcgaaattgttgccaaagaatat
gctggtaacgttaaagccgctaaacgtatggttgaacgtggcgacgaacgcatctgggat
atcttagaagaagttatcaaagaacacccagtcctacttaaccgcgcaccgactcttcac
agacttggtattcaggcttttgaacccgttcttattgacggtaaggcacttcgtcttcac
ccacttgtgtgtgaggcctacaatgccgacttcgatggagaccaaatggccattcacgtg
ccactttcagaagaagcacaagctgaagctcgtcttttgatgcttgctgcagagcacatc
ttgaaccctaaagatggtaaaccagttgttactccatctcaggatatggttcttggtaac
tactatcttacgatggaagatgctggtcgcgaaggcgaaggtatgattttcaaggataaa
gacgaagctgtgatggcatatcgtaatggttatgctcatcttcatagtcgtgtgggtatc
gctgttgacagcatgccaaacaaaccttggaaagacaatcaaagacataaaatcatggtg
acaactgttggtaagattctctttaacgatatcatgccagaggaccttccttacctccaa
gagccaaacaatgccaacttgacagaaggaacacctgataaatacttccttgaacctggt
caagacatccaagaagtgattgatcgcttagacatcaatgtgccatttaagaagaaaaac
ctcggtaacatcattgcggaaaccttcaaacgtttccgtacaacagaaacatcagccttc
cttgaccgcttgaaagaccttggttactaccactcaacccttgctggtttgacagtgggt
atcgctgacattcctgttattgataataaagctgaaatcattgatgctgctcaccatcgt
gttgaagaaattaacaaagccttccgtcgtggtttgatgacagatgatgaccgttatgtt
gccgttacaacaacatggcgtgaagctaaagaagcccttgaaaaacgtctgattgaaaca
caagatcctaagaacccaatcgttatgatgatggactcaggagctcgtggtaacatctca
aacttctcacagcttgctggtatgcgtggtttgatggctgctcctaacggacgcatcatg
gaacttcctatcttgtcaaacttccgtgaaggtttgagcgttttggaaatgttcttctca
acccacggtgcacgtaaagggatgaccgatacggcccttaaaacagccgactcaggttac
cttactcgtcgtttggttgacgttgcccaagatgttatcattcgtgaggacgattgtggc
actgatcgtggtcttcttatccgtgctattacagatggtaaagaagttaccgaaacgctt
gaagagcgtcttcaaggtcgttacacacgtaaatcagtcaaacaccctgaaactggtgaa
gtcttgattggtgctgaccaattaatcactgaagacatggctcgtaagattgttgatgca
ggtgttgaagaagtgaccattcgttctgtctttacctgtgcgactcgtcatggtgtctgc
cgtcactgttatggtatcaacttggcaactggtgatgctgttgaagtgggtgaagcagtt
ggtactattgctgcccaatctatcggtgagcctggtactcagcttaccatgcgtaccttc
cacacgggtggtgtagcctcaaataccgatatcacccagggtcttcctcgtattcaagag
atctttgaagcacgtaatcctaaaggggaagcggtcattactgaagtgaaagggaatgtc
gtcgagattgaagaagatgcgtcaactcgtaccaagaaagtctacgttcaaggaaaaact
ggcatgggcgaatatgtcataccatttacagcacgtatgaaagttgaagttggcgacgaa
gttaatcgcggagctgcccttacagaagggtcaattcaaccgaaacgtctccttgaagtg
cgtgataccttgtcagttgaaacgtaccttcttgcagaagtacaaaaagtttaccgtagc
caaggggtagaaatcggagacaaacacgttgaggtaatggttcgccaaatgcttcgtaaa
gttcgtgtcatggatccaggtgatacagacctccttccaggtacacttatggatatttct
gatttcacagatgctaacaaagatattgttatctctggtggtattcctgcgacatctcgt
cctgttcttatgggtattactaaggcttcccttgaaaccaattccttcttatcagctgca
tccttccaagaaacaactcgtgttcttacagatgctgctatccgtggtaaaaaagatcat
cttcttggtcttaaagaaaatgttatcattggtaaaatcatcccagctggtactggtatg
gctcgttaccgtaacattgaaccacaagcgatgaatgagattgaagtgattgatcataca
gaagtctcagcagaagccgtttttacagcagaagcagaataa

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