KEGG   Serratia quinivorans: E4343_16680
Entry
E4343_16680       CDS       T05941                                 
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
squ  Serratia quinivorans
Pathway
squ00540  Lipopolysaccharide biosynthesis
squ01100  Metabolic pathways
squ01250  Biosynthesis of nucleotide sugars
Module
squ_M00064  ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:squ00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    E4343_16680 (rfaD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:squ01005]
    E4343_16680 (rfaD)
Enzymes [BR:squ01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     E4343_16680 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:squ01005]
 Core region
  E4343_16680 (rfaD)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd 3Beta_HSD RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 ThiF KR adh_short
Other DBs
NCBI-ProteinID: QBX67704
Position
complement(3551868..3552797)
AA seq 309 aa
MIIVTGGAGMIGSNIIKALNDTGYRDILVVDNLKDGTKFANLVDLDIADYIDKEDFIANI
IAGDDLGEIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDLLHYCLEREIPFLYASSAATY
GGREEFIEERQFEAPLNVYGYSKFLFDQYVREILPEAESQICGFRYFNVYGPREGHKGSM
ASVAFHLNGQINRGENPKLFDGSQDFKRDFIYVGDVAAVNLWFLKSGVSGIFNCGTGRAE
TFQAVADAVVDFHQKGAVENIPFPEKLKGRYQAFTQADLTKLRTAGYDAPFKTVAEGVKE
YMAWLNRTA
NT seq 930 nt   +upstreamnt  +downstreamnt
atgattatcgtcactggtggcgccggcatgatcggcagcaatatcattaaggcgctgaat
gacacagggtatcgcgatatcctggtggtagataacctgaaagacggcaccaaattcgcc
aacctggtcgatctcgatatcgccgactatatcgataaagaagatttcatcgccaacatc
attgccggtgacgatctgggcgaaatcgacgccatcttccatgagggcgcctgctcttcc
accaccgagtgggacggcaagtacatgatggacaataactatcagtactccaaagacctg
ctgcactactgcctggaacgcgagatcccgttcctgtatgcctcgtctgctgccacctac
ggcggccgcgaagaatttatcgaagagcgccaatttgaagcaccgctgaacgtctacggc
tactcaaaattcctgttcgaccaatatgtccgtgaaattctgcctgaggcagaatcacag
atctgcggcttccgttacttcaacgtctacggcccgcgcgaaggccacaaaggcagcatg
gccagcgtggcgttccacctgaacggccagatcaaccgtggcgagaacccaaaactgttc
gacggcagtcaagacttcaagcgtgacttcatctacgtcggcgacgtggcggcagtgaac
ctgtggttcttgaaaagcggcgtatccggcatcttcaactgcggcaccggccgtgcggaa
accttccaggcggtcgccgatgccgtggtcgacttccaccagaaaggtgcggtagaaaac
attccgttcccggaaaaactgaagggtcgctaccaggcattcactcaggccgacctgacc
aaactgcgcactgccggctatgacgcaccgttcaaaacggtcgccgaaggcgtgaaagag
tacatggcctggttgaaccgcaccgcttaa

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