KEGG   Serratia quinivorans: E4343_24655
Entry
E4343_24655       CDS       T05941                                 
Name
(GenBank) deoxyribonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
squ  Serratia quinivorans
Pathway
squ03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:squ00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    E4343_24655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:squ03400]
    E4343_24655
Enzymes [BR:squ01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     E4343_24655
DNA repair and recombination proteins [BR:squ03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     E4343_24655
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: QBX69157
Position
complement(5252438..5253277)
AA seq 279 aa
MKFVGAHVSASGGVDQAVIRAHELEATAFALFTKNQRQWKAAPLPADVIDKFKSACAQYG
YGPGQILPHDSYLINLGHPVTEALEKSREAFLDEMQRCEQLGLTLLNFHPGSHLMQIDED
KCLARIAESINLVLDKTSGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTEETCEQTFKELGEVVGFNYLRGMHLNDAKSEFGSRVDRHHSLGEGNIG
KTVFSYIMRDPRFDKIPLILETVNPDIWAEEIAWLKAQQ
NT seq 840 nt   +upstreamnt  +downstreamnt
atgaagtttgtcggtgcacatgtcagcgcgtcaggcggcgtggatcaggcggttatccgc
gcgcacgaattagaggcgaccgcattcgccctgttcactaaaaatcagcgtcaatggaaa
gcagcgccgctgcctgccgatgtgattgataaattcaagagcgcctgcgcgcagtacggt
tacggcccaggacagatcctgccgcacgacagctacctgattaatctcggccacccggtg
accgaggcattggaaaaatcccgcgaagcctttcttgatgagatgcagcgttgtgagcaa
ctggggctgacgctgctgaacttccatcctggcagccatctgatgcaaattgacgaagac
aaatgcctggcacgcatcgctgaatccatcaacctggtgctggataaaaccagcggtgtg
acagcggtgatcgaaaataccgccggtcagggcagtaatctgggctttaagtttgaacat
ttggcggcgatcatcgacggcgtggaagacaaaagccgcgtcggcgtctgcatcgacacc
tgtcacgcttttgccgccggttacgatctgcgtaccgaggaaacctgtgaacagaccttt
aaggaactcggtgaggtggtgggcttcaactatttgcgcggtatgcacctgaacgacgcc
aaaagcgaattcggcagtcgcgttgaccgtcaccacagtctgggtgagggcaacatcggt
aaaacggtgttcagctacatcatgcgcgacccgcgcttcgacaaaatcccgctgatcctg
gaaacggtgaacccggatatctgggcggaagagatcgcctggctaaaagcccagcagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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