KEGG   Streptococcus ratti: FY406_04270
Entry
FY406_04270       CDS       T06620                                 
Symbol
groL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
srat  Streptococcus ratti
Pathway
srat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:srat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FY406_04270 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srat03019]
    FY406_04270 (groL)
   03110 Chaperones and folding catalysts [BR:srat03110]
    FY406_04270 (groL)
   03029 Mitochondrial biogenesis [BR:srat03029]
    FY406_04270 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:srat04147]
    FY406_04270 (groL)
Enzymes [BR:srat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     FY406_04270 (groL)
Messenger RNA biogenesis [BR:srat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     FY406_04270 (groL)
Chaperones and folding catalysts [BR:srat03110]
 Heat shock proteins
  HSP60 / Chaperonin
   FY406_04270 (groL)
Mitochondrial biogenesis [BR:srat03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    FY406_04270 (groL)
Exosome [BR:srat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   FY406_04270 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   FY406_04270 (groL)
  Exosomal proteins of breast cancer cells
   FY406_04270 (groL)
  Exosomal proteins of colorectal cancer cells
   FY406_04270 (groL)
  Exosomal proteins of bladder cancer cells
   FY406_04270 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1 EAD9 DUF4142
Other DBs
NCBI-ProteinID: QEY06913
Position
869099..870724
AA seq 541 aa
MAKDIKFSADARSAMVRGVDTLADTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIE
TAVATAVDGLKAIAQPVSGKEAIAQVAAVSSRSEKVGEYISEAMEKVGNDGVITIEESRG
METELDVVEGMQFDRGYLSQYMVTDNEKMVADLENPYILITDKKISNIQDILPLLEEVLK
TNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVIT
EDLGLELKNATMDALGQAARVTIDKDTTVIVEGSGSKEAIENRVALIKSQIETTTSDFDR
EKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVSGGGTALINV
IEKVAALDLEDDAATGRNIVLRALEEPVRQIAKNAGYEGSVVIDKLKNSPVGTGFNAANG
EWVDMIKEGIIDPVKVTRSALQNAASVASLILTTEAVVADHPAPEAPAAPAMDPSMMGGM
M
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggcaaaagatattaaattttcagcagatgcccgttccgctatggtacgcggcgtagat
actttggcagataccgttaaggtgactttaggccctaaaggacgcaatgtggttcttgaa
aagtcattcggctctcctttgattactaacgatggggtaaccattgctaaggaaatcgaa
ttggaagatcattttgaaaatatgggagccaagctggtttcagaggttgcttcaaaaacc
aatgatattgcaggtgacggtacgacaacagcgactgttttgactcaggcgattgttcgc
gaaggtcttaaaaatgtaacagctggtgccaatccaatcggcatccgccgcggaattgaa
actgccgttgcgacagctgtggacggtttgaaagctattgctcagcctgtttctggtaag
gaagctattgcgcaggttgctgctgtatcttcacgttctgaaaaggtcggggaatacatt
tctgaagctatggaaaaagttggcaatgacggtgttatcacgattgaagaatcacgcggc
atggaaactgagcttgacgttgttgaaggaatgcagtttgaccgcggctacctgtctcaa
tacatggtaacagataatgaaaaaatggttgccgatctggaaaatccttatattttaatt
accgataagaaaatttcaaacattcaagatattcttcctttgctggaagaagttcttaaa
actaatcgtccgcttttgattattgctgatgatgtggatggtgaagctcttccaacctta
gttttaaataaaatccgcggtaccttcaatgttgtggctgttaaggctcccggctttggt
gaccgccgtaaggctatgttagaagatattgctatcttaactggcggaactgtcattaca
gaagaccttggtctcgaacttaaaaatgcgacaatggatgctctaggccaagcggcccgc
gtcacaattgataaggatacaactgtcattgttgaaggttcaggcagcaaggaagctatt
gaaaaccgcgttgcacttatcaaatcgcaaattgaaacaacaacttcagactttgaccgt
gaaaaactgcaagaacgtttagctaaattatcaggcggtgttgctgtcattaaagtcgga
gcagctactgaaacagagttaaaagaaatgaaacttcgtattgaagatgcgcttaatgcg
acacgtgctgctgttgaagaaggtattgtatcaggaggcggtaccgctcttatcaatgta
attgaaaaggttgctgcccttgacttggaagatgatgctgcaacaggccgcaatattgtt
ctgcgtgccttggaagaacctgttcgccaaattgctaagaatgctggctatgaaggttcg
gtcgttattgacaaattgaagaacagccctgtaggaacaggcttcaatgctgccaatggt
gagtgggttgatatgattaaagaaggcatcattgaccctgtgaaggtgacccgttcagct
ctgcaaaatgcggcttctgtagcaagccttattctgacaacagaagcagttgtagctgat
catccagcaccagaagctcctgcagctccagccatggatccaagcatgatgggcggcatg
atgtaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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