KEGG   Spirosoma radiotolerans: SD10_19995
Entry
SD10_19995        CDS       T03819                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
srd  Spirosoma radiotolerans
Pathway
srd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:srd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SD10_19995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srd03400]
    SD10_19995
DNA repair and recombination proteins [BR:srd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SD10_19995
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SD10_19995
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_5 AAA_30 AAA_16 DUF87 AAA_22 UB2H AAA_33 DUF2785
Other DBs
NCBI-ProteinID: AKD56845
UniProt: A0A0E3ZY96
Position
4931229..4933250
AA seq 673 aa
MDFKLTSEFQPTGDQPKAIEQLVKGINEGEPAQVLLGVTGSGKTFTVANLIARTNRPTLV
LSHNKTLAAQLYGEFKQFFPENAVEYFISYYDYYQPEAFIATTNTYIEKDLAINEEIDKL
RLAATSALMSGRRDVIVVASVSCIYGMGNPEEFKRNVVTIGVGQQMSRNQFLHQLVSILY
SRTEGEFQRGNFRVKGDTVDLYVAYADFAYRVIFFGDEIETIQRIDPGTGKKISAESIVT
IFPANLFVTGRDTLNDAMYQIQDDMVAQVRYFESEFREQEATRIRERTEFDLEMMRELGY
CSGIENYSRYFDKRKPGQRPFCLLDYFPDDYLMVIDESHATIPQIRAMWGGDRSRKTALV
DYGFRLPSAMDNRPLTFQEFEDLSGQAIYVSATPSDYELRKSEGVVVEQLIRPTGLLDPE
IEVRPSLNQIDDLLESIDSRIKNGERVLVTTLTKRMAEELTKYLDRVGIKTRYIHSEVKT
LERVEILRDLRLGNFDVLVGVNLLREGLDLPEVSLVAIMDADKEGFLRDIRSLIQTIGRA
ARNANGKVIMYADRITGSMEKAIDETNRRRAIQLEYNMDNGITPTTVLKSREAIMGQTKV
ADSKAKHFYVEPEEIRIAADPVVRYMGKGDLEKMINETQSKMERAAKDLDFMEAARLRDE
LFQLRDKLKKETV
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggactttaaactaacctctgaatttcaaccaaccggcgatcagccaaaggccatcgaa
cagttggttaaaggtataaacgagggcgaaccagcacaggtactcttaggcgtaaccggt
tccggaaagacctttacggtcgctaacctcatcgcgcgaaccaaccggccaacgctcgta
ttgagccataacaagaccctggcagcgcagctttacggtgaattcaaacaattttttccg
gaaaatgcggtcgagtattttatctcttactacgactattaccagccggaagccttcatt
gctactaccaatacgtacatcgaaaaagatctggctatcaacgaagaaattgataaactt
cggctggcggccacctcggccctgatgagtggtcggcgcgatgtcattgtagtagcttcg
gtatcgtgtatctacggcatgggcaatcccgaagagttcaaacgaaacgtggtgacgatt
ggcgtcggtcaacaaatgagccgcaaccagtttttacaccagttggtcagcatcctgtac
agccgcacggaaggtgaatttcaacggggcaacttccgtgtaaagggcgacacggtcgat
ctctatgtcgcctacgccgattttgcctatcgtgtcattttcttcggcgacgaaatcgaa
accattcagcgaatcgatcccggcacgggcaaaaaaatatcggccgaaagcattgtgacc
atcttcccggccaatcttttcgtaactggccgcgacaccctcaacgatgccatgtaccag
attcaggatgacatggtagcgcaggtacgttattttgaatcggagtttcgtgaacaggag
gctacccgcatacgcgaacgaacggagttcgacctcgaaatgatgcgtgaattaggctac
tgctctggtattgagaactattcgcgctattttgataaacgaaaaccaggccagcgcccc
ttctgcctgctcgactatttcccggatgattacctgatggtgatcgacgaaagtcacgcg
acaattccgcaaatccgagccatgtgggggggcgaccgctcccggaaaaccgccctcgtc
gattatggtttccgcctgccctcggccatggacaaccgcccgcttacgttccaggaattt
gaagatttatccggccaggccatttacgtatcggcaacaccatcggattatgaacttcgg
aaaagcgaaggcgtggtggtcgaacagctcatccggccaacgggcttgctcgatcccgaa
attgaagtccgtcctagcctgaaccagatcgacgatctgctcgaatccatcgacagccgc
atcaaaaatggggaacgggttctggttactacgctaaccaaacgcatggccgaagaactg
accaaatacctggaccgggtgggcataaaaacccgctatattcactctgaggtaaaaacc
ctggagcgagtcgagattctgcgggatttacggctgggtaattttgatgtgctcgtgggc
gtcaacctgcttcgggaggggcttgacctgcccgaagtatcgctggttgccattatggat
gccgacaaagaaggcttcctgcgtgacattcggtcgttgattcaaaccatcggccgtgca
gcccgaaacgcgaatggtaaagtgattatgtatgctgaccgaatcacgggttcgatggaa
aaagccatcgatgaaaccaaccgacgccgggccattcagttagagtataacatggacaac
gggattacaccgacaacggtgctgaaatcgcgtgaggccattatgggtcaaaccaaagtg
gccgattcgaaggccaaacatttctacgtagagcccgaagaaatccggattgctgccgat
ccggtggtgcgctacatgggtaaaggtgatctggagaaaatgatcaacgaaacccaatcg
aaaatggagcgtgccgccaaagacctcgactttatggaagcggcccgcctgcgcgacgag
ttgtttcagttgcgggacaagttgaagaaagaaacggtgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (22)   

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