KEGG   Salpingoeca rosetta: PTSG_04681
Entry
PTSG_04681        CDS       T04136                                 
Name
(RefSeq) DNA topoisomerase II, variant
  KO
K03164  DNA topoisomerase II [EC:5.6.2.2]
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sre03032]
    PTSG_04681
   03036 Chromosome and associated proteins [BR:sre03036]
    PTSG_04681
Enzymes [BR:sre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PTSG_04681
DNA replication proteins [BR:sre03032]
 Eukaryotic type
  DNA Topoisomerases
   PTSG_04681
Chromosome and associated proteins [BR:sre03036]
 Eukaryotic type
  Chromosome condensation proteins
   Other regulators of chromosome condensation
    PTSG_04681
  Centrosome formation proteins
   Centriole proteins
    PTSG_04681
SSDB
Motif
Pfam: DNA_topoisoIV TOPRIM_C DNA_gyraseB HATPase_c Toprim
Other DBs
NCBI-GeneID: 16075353
NCBI-ProteinID: XP_004994771
UniProt: F2U845
Position
Unknown
AA seq 1761 aa
MASKVLKARNSSSSTTQAMKKSKKGADAGKTVEEIYQKKTQLEHILLRPDTYIGSVESNT
KNLFVVDPEAGFVQREITYVPGLYKIFDEIIVNAADNKIRDPTMDCIKVTIDKAKAEISV
YNTGKGIPVQVHAKEGVYVPELIFGHLLTSSNYDDNQKKVTGGRNGYGAKLCNIFSTKFV
VETCDTETGKKYRQVFRDNMAIKEDPVIVKTKSSDKDFTRITFRPDLSKFHMSELDDDII
ALMARRVYDVAGTTRGIKVYLNNERLPVRHFKDYVNLVLRDQNVDTKVVHEVVNDRWEVC
MTLSENGFQQMSFVNSIATTKGGTHVNYVADQIVSGLLSTIKRKNKGAAVKPHQVKNHMW
LFINCLIENPSFDSQTKENMTRRSKDFGSNPVLSDKFLKNIKDTGIVDAVLNWAKLKSQA
QLSKASSGSKKCKISGIPKLDDANEAGGRNSSKCTLILTEGDSAKALAVSGLGVLGRDYY
GVFPLRGKLLNVREASHKQIMDNAEVKNIAKIMGLKFGHEYTTTKQLRYGRLMIMTDQDQ
DGSHIKGLLINFIHHFWPSLLKMPDFLVEFVTPIVKCTKGKQEVSFFTIPQYETWAEQQG
NLKGWRIKYYKGLGTSTPQEAKEYFSHMDDHQIPFSYEGDKDFEDIVMAFSKKHVEARKQ
WLKNFVPGTYLDHATDAICYSDFINKELILFSMADNVRSIPSIMDGLKPGQRKVLFSCFK
RKLKDEIKVAQLAGYVSEHSAYHHGEMSLAGTIVGMAQRFVGSNNLNLLLPIGQFGTRLA
GGKDAASSRYIFTSLSPLARKIFHLADDALLNHLEDDGQTIEPEFYAPILPMVLVNGSDG
IGTGWSSSVPNYNPRDLVNALIAMIEGQEPDELHPWYAGFTGEITPKGKDKYAVRGTLKK
LDETTIEISELPIRTWTQPYKEFLEGLAADDGKKPPQILEFSQYHTDTTVRFVVSMTPEQ
MQAAETKGLYKVFKLEGSISTSNMTLFDPQGRIKKYEGVQEILRDFFDVRLRLYQKRKSL
LADCMTSEYKKMDNKVRFILDVISGSLVISNRKKADILQELRAKGFAAFPKPKGKKGAKT
VGDLDDDAAGAPPSSDEDEALEESASDFDYLLSMPMWNLTMERVDKLTEERNGTEAELNA
LLEKTPQDLWKEDLTAFVEALAEIEAAEEEQELNMSQVIEKNLKKSKAKRKTTRKKKATA
AAKKSKKQAVKAEAMDDDNDDDDFAGDDAYAFTGGDDDDWMPPGGVTTAPKTKKGAAKAK
KSTRQLDIKESLSNGGAKTTKRSMRTAAKVAQKRTQKMEEEVDDEDVDDEVEWDMPAAQS
KSSSDTSSNSIALDGDDDDDDEEFKGGLFARLQTRRRNVAASPDETVSVSSSSRSSTSSK
ASSTNGGRRGAAKRGAAKRTFDESRSPSPAGGEEDEDFVLDVSDDEEGENDAGDDSDWEA
PALASKAKGKKKAAATAKASRGAKAAKKTTAAAKKTTKAATTAKRKAAAKKSSTKAKAAE
DEDDLDTSVFDFGADGSVSNDDDNNNADDDDFSVASLTSRRGRGAAAAKGKKAKAAPAAK
RGQRKTKAAIVDAVISDDSDDDDEAVVVAAKAKKTTATRGKKAAGTKTKAATKTTKARRT
GRKVIADDDDDDDIDADGGMDDSWMPDSPAAPKAKGNKKAKKAAPVKKVKKATTTAKRSS
RRVLSDDDDGADEDNSTGGRSRRPRRTRKKVDYAAMMESDDEANGAAQNDGANEDEQEVM
DFKDDDSDFDAADESDSEFEL
NT seq 5286 nt   +upstreamnt  +downstreamnt
atggcaagcaaggttctgaaagctcgcaactcgtcgtcgtcgacgacgcaggcgatgaag
aagtccaagaagggcgccgacgccggcaagacggtggaggagatctaccagaagaagacg
cagctcgagcacattctcctgcgtccagacacctacattggctctgtcgagagcaacacc
aagaacctctttgtcgtggacccagaggcgggttttgtccagcgtgagatcacctacgtc
cccggcctctacaagatctttgacgaaatcatcgtcaatgccgctgacaacaagatccgc
gatcccaccatggattgcatcaaagtgaccatcgacaaggccaaggcggaaatctcggtg
tacaacacgggcaagggcattcccgtgcaagtgcacgctaaggaaggcgtttacgtgcct
gagctcatctttggccacctcctcacttcctcaaactacgacgacaaccagaagaaggtc
acgggtggacgcaacggctatggtgccaagctgtgcaacatcttcagcaccaagtttgtc
gtcgagacgtgcgacacggaaacgggcaagaaataccgccaggtctttcgcgacaacatg
gccatcaaggaggaccccgtcatcgtcaagacaaagtcttcggacaaggactttacgcgc
atcacgttccggccggacctgagcaagtttcacatgagcgagctggacgacgacatcatt
gcgctgatggcgcgacgcgtgtacgatgtggccggcaccacgcgcggcatcaaggtctac
ctcaacaatgagcggctccccgtcaggcacttcaaggactacgtcaacctcgtcctccgc
gaccagaacgtggacaccaaggttgtgcacgaggttgtcaacgaccgctgggaagtgtgc
atgaccctcagcgaaaacggcttccaacagatgagctttgtcaactcaattgcgacgaca
aaaggcgggacgcacgtgaactacgtcgccgaccagattgtgtctggtctgctgtcgacc
atcaagcgcaagaacaagggcgcagcggtgaagccgcaccaggtcaagaaccacatgtgg
ctcttcatcaactgcctgattgagaacccctcgtttgactcgcagacaaaggagaacatg
acgcggcgctccaaggactttggctccaacccggtgctgagcgacaagtttctcaagaac
atcaaggacacgggcattgtggacgccgtgctcaactgggccaagctcaaatcgcaggcg
cagctgtcaaaggcgagcagcggcagcaaaaagtgcaagatctccggcatccccaagctg
gacgacgccaacgaggccggcgggcgcaactcgtcaaagtgcacgctcatcctgaccgag
ggtgactccgccaaggcgctggcggtgagcgggctgggcgtgcttgggcgcgactactac
ggcgtcttcccgctccgcggcaagctgcttaacgtgcgcgaggcgtcgcacaagcagatt
atggacaacgcggaggtgaagaacattgccaagatcatgggcctcaagtttgggcacgag
tacacgacgacgaagcagctccgatacgggcggctcatgatcatgaccgatcaggatcag
gacggctcccacatcaagggcctcctcatcaacttcatccaccacttctggccctccttg
ctcaagatgcctgattttctggttgagtttgtgacgccgattgtcaagtgcacaaagggc
aagcaggaggtgtccttcttcaccatcccgcagtacgaaacctgggccgagcagcagggc
aacctcaagggctggcgcatcaagtactacaaaggtctgggtaccagcacaccgcaggag
gccaaggagtacttttcgcacatggacgaccaccagattccgttctcctacgagggcgac
aaggactttgaggacattgtgatggcctttagcaagaagcacgtcgaggcgcgcaagcag
tggctcaagaactttgtgccgggcacgtacctggaccacgccacggatgccatctgctac
tcggacttcattaacaaggagctgattctgttctccatggcggacaacgtgcggtccatc
cccagcatcatggacgggctcaagccgggccagcgcaaggtgctcttctcctgcttcaag
cgcaagctcaaggacgagatcaaggtggcgcagcttgccgggtacgtctcggagcactcg
gcctaccaccacggcgagatgagcctggccggcaccattgtgggcatggcgcagcggttc
gtgggcagcaacaacctcaacctgctgctgcccattggccagtttggcacgcgcctggcg
ggcggcaaggacgcggccagctcgcgttacatcttcacctcactgtcgccgctggcgcgc
aagatcttccacttggcggacgacgccctgctcaaccacctggaggacgacgggcagacg
attgagccagagttttacgcgcccatcctgcccatggtgctggtgaacggcagcgacggc
atcggcacgggctggtcctcgtccgtgccaaactacaacccgcgcgacctggtcaacgcc
ctcattgccatgattgaggggcaggagccggacgagctgcacccctggtacgccggcttc
acgggcgagatcacgccaaagggcaaggacaagtacgcggtgcgcggcacgctgaagaaa
ctcgacgagacgacgattgagatctcggagctgcccatccgcacgtggacgcagccgtac
aaggagtttctggagggcctggcggcggacgacggcaagaagccgccgcagattctcgag
ttttcgcagtaccacacagacacgacggtgcgctttgtggtgtcgatgacgcccgagcag
atgcaggctgcggagaccaagggcctgtacaaggtcttcaagctggagggctcaatctcc
acgtccaacatgacgctgttcgacccgcaggggcgcatcaagaagtacgagggcgtgcag
gagattctgcgcgactttttcgacgtgcgcctgcgcctgtaccagaagcgcaagagcctc
ctggcggactgcatgacctccgagtacaagaagatggacaacaaggtgcgcttcatcctg
gacgtgatcagcggctcgctcgtcatcagcaaccgcaagaaggccgacattttgcaggag
ctgcgcgccaagggctttgcggcgttccccaagcccaagggcaagaagggcgccaagacg
gtcggcgacctggacgacgacgcagccggcgcgccgccgtcgtcggacgaggacgaggcg
ctggaggagtctgcatcggactttgactacctgctgagcatgcccatgtggaacctgacc
atggagcgggtggacaagctgacggaggagcgcaacggcaccgaggcggagctcaacgcg
ctgctggagaagacgccgcaggacctgtggaaggaggacctgaccgcgtttgtggaggcg
ctggcggagattgaggccgcggaggaggagcaggagctcaacatgagccaggtcattgag
aagaacctcaaaaagtccaaggccaagcgcaagaccacccgcaagaagaaggcgacggcg
gctgcgaagaagagcaagaaacaggctgtcaaggcggaggcgatggatgacgacaacgac
gacgacgactttgcgggcgacgacgcgtacgcgttcactggcggcgatgacgatgactgg
atgccgccgggcggcgtgacgacggcaccaaagacgaagaagggtgccgccaaggccaag
aagagcacgcggcagctggacatcaaggagtccctgagcaacggcggcgccaaaacgacg
aagcgcagcatgcgcaccgcagccaaggtggcgcagaagaggacgcagaagatggaggag
gaggtggacgacgaggacgttgacgacgaggttgagtgggacatgcctgctgcgcaatcc
aagagcagcagcgacaccagctcaaactccattgccctcgatggcgatgacgatgatgat
gatgaggagttcaagggtggtctgtttgcgcgcctgcagacacgtcgccgtaacgtggcg
gcctcgcccgacgagacggtgtccgtgtcttcttcctctcgcagcagcacgagtagcaag
gcaagcagcaccaacggcggccggcgcggtgcggccaagcgtggcgccgccaagcgcacg
tttgacgagagccgatcgccctcgcccgcagggggcgaggaggacgaagactttgtgctg
gacgtgtctgacgatgaggagggggagaacgatgctggtgacgacagcgactgggaggca
cccgccctcgcgtccaaggcaaagggcaagaagaaggccgctgcgacggcaaaagcaagc
cgcggtgcgaaggcggccaagaagacaacagcagcagcgaagaagacgaccaaggctgca
accacagccaagcgcaaggccgctgcgaagaagagcagcaccaaggccaaggctgcggaa
gatgaggatgacctcgacacgtccgtgtttgattttggggcggatggaagcgtgagcaac
gacgacgacaacaacaacgctgacgatgatgatttctctgtcgccagcctgacgagccgc
cgtggtcgtggtgctgcggctgccaagggcaagaaggccaaggccgcacccgccgcaaag
cgcgggcagcgaaagacgaaggctgctatcgtggacgcggtcatctctgacgactcggac
gacgacgacgaagcggtggtggtggcagcaaaggccaagaagacaaccgcaacaaggggc
aagaaggcggcaggcaccaagacgaaagcagcgaccaaaacaacaaaggcgcgccgcacg
ggccgcaaggtgattgccgatgacgacgacgacgacgacattgatgctgacggtggcatg
gacgacagctggatgcctgacagccctgctgcgccaaaggccaaggggaacaagaaggcg
aaaaaggctgcgcccgtgaagaaagtcaagaaggcgacgacgactgcgaagcgcagcagt
cgccgcgtcctcagcgacgatgacgacggtgccgacgaggacaacagcacgggtggccgg
tcgcgtcgtccgcgacgcacgcggaagaaggtcgactatgccgccatgatggagagcgac
gatgaagcgaacggcgcagcgcagaacgacggcgccaacgaggacgagcaggaggtcatg
gacttcaaggacgacgacagcgactttgacgccgcagacgaaagtgactctgagtttgag
ctgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (186)   
   KEGG ORTHOLOGY (1)   
   RefGene (182)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (202)   

Download RDF
DBGET integrated database retrieval system